[HTML][HTML] Polishing the craft of genetic diversity creation in directed evolution

KL Tee, TS Wong - Biotechnology advances, 2013 - Elsevier
Genetic diversity creation is a core technology in directed evolution where a high quality
mutant library is crucial to its success. Owing to its importance, the technology in genetic …

To get what we aim for–progress in diversity generation methods

AJ Ruff, A Dennig, U Schwaneberg - The FEBS journal, 2013 - Wiley Online Library
Protein re‐engineering by directed evolution has become a standard approach for tailoring
enzymes in many fields of science and industry. Advances in screening formats and …

Computer‐assisted Recombination (CompassR) teaches us how to recombine beneficial substitutions from directed evolution campaigns

H Cui, H Cao, H Cai, KE Jaeger… - … A European Journal, 2020 - Wiley Online Library
A main remaining challenge in protein engineering is how to recombine beneficial
substitutions. Systematic recombination studies show that poorly performing variants are …

How to engineer organic solvent resistant enzymes: Insights from combined molecular dynamics and directed evolution study

H Cui, THJ Stadtmüller, Q Jiang, KE Jaeger… - …, 2020 - Wiley Online Library
Expanding synthetic capabilities to routinely employ enzymes in organic solvents (OSs) is a
dream for protein engineers and synthetic chemists. Despite significant advances in the field …

Genomic mapping of phosphorothioates reveals partial modification of short consensus sequences

B Cao, C Chen, MS DeMott, Q Cheng, TA Clark… - Nature …, 2014 - nature.com
Bacterial phosphorothioate (PT) DNA modifications are incorporated by Dnd proteins AE
and often function with DndF-H as a restriction-modification (RM) system, as in Escherichia …

Testing the causality between CYP9M10 and pyrethroid resistance using the TALEN and CRISPR/Cas9 technologies

K Itokawa, O Komagata, S Kasai, K Ogawa, T Tomita - Scientific reports, 2016 - nature.com
Recently-emerging genome editing technologies have enabled targeted gene knockout
experiments even in non-model insect species. For studies on insecticide resistance …

Combinatorial Engineering of 1-Deoxy-D-Xylulose 5-Phosphate Pathway Using Cross-Lapping In Vitro Assembly (CLIVA) Method

R Zou, K Zhou, G Stephanopoulos, HP Too - PloS one, 2013 - journals.plos.org
The ability to assemble multiple fragments of DNA into a plasmid in a single step is
invaluable to studies in metabolic engineering and synthetic biology. Using …

[HTML][HTML] A roadmap to directed enzyme evolution and screening systems for biotechnological applications

R Martínez, U Schwaneberg - Biological research, 2013 - SciELO Chile
Enzymes have been long used in man-made biochemical processes, from brewing and
fermentation to current industrial production of fine chemicals. The ever-growing demand for …

Intrathymic differentiation of natural antibody-producing plasma cells in human neonates

H Cordero, RG King, P Dogra, C Dufeu, SB See… - Nature …, 2021 - nature.com
The thymus is a central lymphoid organ primarily responsible for the development of T cells.
A small proportion of B cells, however, also reside in the thymus to assist negative selection …

Recombination of single beneficial substitutions obtained from protein engineering by Computer-assisted Recombination (CompassR)

H Cui, MD Davari, U Schwaneberg - Directed Evolution: Methods and …, 2022 - Springer
A large number of beneficial substitutions can be obtained from a successful directed
enzyme evolution campaign and/or (semi) rational design. It is expected that the …