Comparative phylogeography of unglaciated eastern North America

DE Soltis, AB Morris, JS McLachlan… - Molecular …, 2006 - Wiley Online Library
Regional phylogeographical studies involving co‐distributed animal and plant species have
been conducted for several areas, most notably for Europe and the Pacific Northwest of …

Nuclear DNA analyses in genetic studies of populations: practice, problems and prospects

DX Zhang, GM Hewitt - Molecular ecology, 2003 - Wiley Online Library
Population‐genetic studies have been remarkably productive and successful in the last
decade following the invention of PCR technology and the introduction of mitochondrial and …

[引用][C] Phylogeography: The History and Formation of Species

JC Avise - 2000 - books.google.com
Phylogeography is a discipline concerned with various relationships between gene
genealogies—phylogenetics—and geography. The word “phylogeography” was coined in …

Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungusfusariumare nonorthologous

K O'Donnell, E Cigelnik - Molecular phylogenetics and evolution, 1997 - Elsevier
The evolutionary history of the phytopathogenicGibberella fujikuroicomplex ofFusariumand
related species was investigated by cladistic analysis of DNA sequences obtained from …

Gaps as characters in sequence-based phylogenetic analyses

MP Simmons, H Ochoterena - Systematic biology, 2000 - JSTOR
In the analysis of sequence-based data matrices, the use of different methods of treating
gaps has been demonstrated to in? fluence the resulting phylogenetic hypothe? ses (eg …

Molecular systematics and phylogeography of the Gibberella fujikuroi species complex

K O'Donnell, E Cigelnik, HI Nirenberg - Mycologia, 1998 - Taylor & Francis
Phylogenetic relationships of the phyto-pathogenic Gibberella fujikuroi species complex
were investigated by maximum parsimony analysis of DNA sequences from multiple loci …

A multigene phylogeny of the Gibberella fujikuroi species complex: detection of additional phylogenetically distinct species

K O'Donnell, HI Nirenberg, T Aoki, E Cigelnik - Mycoscience, 2000 - Elsevier
Phylogenetic relationships within the Gibberella fujikuroi species complex were extended to
newly discovered strains using nucleotide characters obtained by sequencing polymerase …

The current state of insect molecular systematics: a thriving Tower of Babel

MS Caterino, S Cho, FAH Sperling - Annual review of …, 2000 - annualreviews.org
▪ Abstract Insect molecular systematics has undergone remarkable recent growth. Advances
in methods of data generation and analysis have led to the accumulation of large amounts of …

[HTML][HTML] GapCoder automates the use of indel characters in phylogenetic analysis

ND Young, J Healy - BMC bioinformatics, 2003 - Springer
Background Several ways of incorporating indels into phylogenetic analysis have been
suggested. Simple indel coding has two strengths:(1) biological realism and (2) efficiency of …

Choosing an approach and an appropriate gene for phylogenetic analysis

DE Soltis, PS Soltis - Molecular systematics of plants II: DNA sequencing, 1998 - Springer
A diverse array of molecular approaches is now available to the plant systematist for use in
phylogenetic inference, including restriction site analysis, comparative sequencing, analysis …