CERAPP: collaborative estrogen receptor activity prediction project
K Mansouri, A Abdelaziz, A Rybacka… - Environmental …, 2016 - ehp.niehs.nih.gov
Background: Humans are exposed to thousands of man-made chemicals in the
environment. Some chemicals mimic natural endocrine hormones and, thus, have the …
environment. Some chemicals mimic natural endocrine hormones and, thus, have the …
Generative topographic mapping in drug design
This is a review article of Generative Topographic Mapping (GTM)–a non-linear
dimensionality reduction technique producing generative 2D maps of high-dimensional …
dimensionality reduction technique producing generative 2D maps of high-dimensional …
Predicting highly enantioselective catalysts using tunable fragment descriptors
Catalyst optimization processes typically rely on inductive and qualitative assumptions of
chemists based on screening data. While machine learning models using molecular …
chemists based on screening data. While machine learning models using molecular …
Chemspace atlas: multiscale chemography of ultralarge libraries for drug discovery
Y Zabolotna, F Bonachera, D Horvath… - Journal of Chemical …, 2022 - ACS Publications
Nowadays, drug discovery is inevitably intertwined with the usage of large compound
collections. Understanding of their chemotype composition and physicochemical property …
collections. Understanding of their chemotype composition and physicochemical property …
A novel strategy for designing the magic shotguns for distantly related target pairs
Y Luo, P Wang, M Mou, H Zheng, J Hong… - Briefings in …, 2023 - academic.oup.com
Due to its promising capacity in improving drug efficacy, polypharmacology has emerged to
be a new theme in the drug discovery of complex disease. In the process of novel multi …
be a new theme in the drug discovery of complex disease. In the process of novel multi …
Mappability of drug-like space: towards a polypharmacologically competent map of drug-relevant compounds
Intuitive, visual rendering—mapping—of high-dimensional chemical spaces (CS), is an
important topic in chemoinformatics. Such maps were so far dedicated to specific compound …
important topic in chemoinformatics. Such maps were so far dedicated to specific compound …
Modern level for properties prediction of iodine-containing organic compounds: the halogen bonds formed by iodine
EV Bartashevich, EA Grigoreva, ID Yushina… - Russian Chemical …, 2017 - Springer
The modern concepts on specific features of anisotropy of the electron density of valence
shells of bound atoms and chemical bonds providing the successful description of the …
shells of bound atoms and chemical bonds providing the successful description of the …
Consensus QSAR models estimating acute toxicity to aquatic organisms from different trophic levels: algae, Daphnia and fish
F Lunghini, G Marcou, P Azam, MH Enrici… - SAR and QSAR in …, 2020 - Taylor & Francis
We report new consensus models estimating acute toxicity for algae, Daphnia and fish
endpoints. We assembled a large collection of 3680 public unique compounds annotated …
endpoints. We assembled a large collection of 3680 public unique compounds annotated …
Challenges for kinetics predictions via neural network potentials: a Wilkinson's catalyst case
R Staub, P Gantzer, Y Harabuchi, S Maeda, A Varnek - Molecules, 2023 - mdpi.com
Ab initio kinetic studies are important to understand and design novel chemical reactions.
While the Artificial Force Induced Reaction (AFIR) method provides a convenient and …
While the Artificial Force Induced Reaction (AFIR) method provides a convenient and …
NP navigator: a new look at the natural product chemical space
Natural products (NPs), being evolutionary selected over millions of years to bind to
biological macromolecules, remained an important source of inspiration for medicinal …
biological macromolecules, remained an important source of inspiration for medicinal …