[HTML][HTML] Quantum biology: An update and perspective

Y Kim, F Bertagna, EM D'souza, DJ Heyes… - Quantum …, 2021 - mdpi.com
Understanding the rules of life is one of the most important scientific endeavours and has
revolutionised both biology and biotechnology. Remarkable advances in observation …

Homogenizing bacterial cell factories: analysis and engineering of phenotypic heterogeneity

D Binder, T Drepper, KE Jaeger, F Delvigne… - Metabolic …, 2017 - Elsevier
In natural habitats, microbes form multispecies communities that commonly face rapidly
changing and highly competitive environments. Thus, phenotypic heterogeneity has evolved …

Systematic characterization of maturation time of fluorescent proteins in living cells

E Balleza, JM Kim, P Cluzel - Nature methods, 2018 - nature.com
The slow maturation time of fluorescent proteins (FPs) limits the temporal accuracy of
measurements of rapid processes such as gene expression dynamics and effectively …

Human gut bacteria tailor extracellular vesicle cargo for the breakdown of diet-and host-derived glycans

MG Sartorio, EJ Pardue, NE Scott… - Proceedings of the …, 2023 - National Acad Sciences
Extracellular vesicles are produced in all three domains of life, and their biogenesis has
common ancient origins in eukaryotes and archaea. Although bacterial vesicles were …

Comparative assessment of fluorescent proteins for in vivo imaging in an animal model system

JK Heppert, DJ Dickinson, AM Pani… - Molecular biology of …, 2016 - Am Soc Cell Biol
Fluorescent protein tags are fundamental tools used to visualize gene products and analyze
their dynamics in vivo. Recent advances in genome editing have expedited the precise …

Gene expression model inference from snapshot RNA data using Bayesian non-parametrics

Z Kilic, M Schweiger, C Moyer, D Shepherd… - Nature computational …, 2023 - nature.com
Gene expression models, which are key towards understanding cellular regulatory
response, underlie observations of single-cell transcriptional dynamics. Although RNA …

Standardization in synthetic biology: an engineering discipline coming of age

T Decoene, B De Paepe, J Maertens… - Critical reviews in …, 2018 - Taylor & Francis
Background: Leaping DNA read-and-write technologies, and extensive automation and
miniaturization are radically transforming the field of biological experimentation by providing …

Identifying constitutive and context-specific molecular-tension-sensitive protein recruitment within focal adhesions

A Tao, AS LaCroix, TC Shoyer, V Venkatraman, KL Xu… - Developmental cell, 2023 - cell.com
Mechanosensitive processes often rely on adhesion structures to strengthen, or mature, in
response to applied loads. However, a limited understanding of how the molecular tensions …

Systematic In Vivo Characterization of Fluorescent Protein Maturation in Budding Yeast

P Guerra, LA Vuillemenot, B Rae, V Ladyhina… - ACS synthetic …, 2022 - ACS Publications
Fluorescent protein (FP) maturation can limit the accuracy with which dynamic intracellular
processes are captured and reduce the in vivo brightness of a given FP in fast-dividing cells …

Chemical warfare and survival strategies in bacterial range expansions

MF Weber, G Poxleitner, E Hebisch… - Journal of The …, 2014 - royalsocietypublishing.org
Dispersal of species is a fundamental ecological process in the evolution and maintenance
of biodiversity. Limited control over ecological parameters has hindered progress in …