Fish intestinal microbiome: diversity and symbiosis unravelled by metagenomics

AM Tarnecki, FA Burgos, CL Ray… - Journal of applied …, 2017 - academic.oup.com
The gut microbiome of vertebrates plays an integral role in host health by stimulating
development of the immune system, aiding in nutrient acquisition and outcompeting …

Exploring fish microbial communities to mitigate emerging diseases in aquaculture

I de Bruijn, Y Liu, GF Wiegertjes… - FEMS Microbiology …, 2018 - academic.oup.com
Aquaculture is the fastest growing animal food sector worldwide and expected to further
increase to feed the growing human population. However, existing and (re-) emerging …

Metagenomic analysis of composition, function and cycling processes of microbial community in water, sediment and effluent of Litopenaeus vannamei farming …

M Zhang, L Pan, F Huang, S Gao, C Su, M Zhang, Z He - Aquaculture, 2019 - Elsevier
With the increasing production of farmed Litopenaeus vannamei, the discharge of culture
sewage and the accumulation of deleterious substances (nitrite, ammonia, sulfide…) in …

Whole‐genome sequencing of brown‐marbled grouper (Epinephelus fuscoguttatus) provides insights into adaptive evolution and growth differences

Y Yang, T Wang, J Chen, L Wu, X Wu… - Molecular Ecology …, 2022 - Wiley Online Library
The brown‐marbled grouper (Epinephelus fuscoguttatus) is an important species of fish in
the coral reef ecosystem and marine aquaculture industry. In this study, a high‐quality …

[HTML][HTML] Microbial diversity and parasitic load in tropical fish of different environmental conditions

P Hennersdorf, S Kleinertz, S Theisen, MA Abdul-Aziz… - PLoS …, 2016 - journals.plos.org
In this study we analysed fecal bacterial communities and parasites of three important
Indonesian fish species, Epinephelus fuscoguttatus, Epinephelus sexfasciatus and Atule …

[HTML][HTML] Shifts in the Skin-Associated Microbiota of Hatchery-Reared Common Snook Centropomus undecimalis During Acclimation to the Wild

AM Tarnecki, NP Brennan, RW Schloesser, NR Rhody - Microbial ecology, 2019 - Springer
The skin-associated microbiota of fish competes against pathogens for space and nutrients,
preventing colonization by harmful bacteria encountered during environmental transitions …

Effects of ammonia and roxithromycin exposure on skin mucus microbiota composition and immune response of juvenile yellow catfish Pelteobagrus fulvidraco

D Yuan, S Wang, X Li, M Zhang, M Li - Fish & Shellfish Immunology, 2023 - Elsevier
As an inevitable factor in aquaculture, ammonia plays a critical role in macrolide antibiotic
resistance, leading to accumulating of antibiotic-resistant bacteria in fish skin mucus. In this …

Switching on the light: using metagenomic shotgun sequencing to characterize the intestinal microbiome of Atlantic cod

ES Riiser, THA Haverkamp… - Environmental …, 2019 - Wiley Online Library
Atlantic cod (Gadus morhua) is an ecologically important species with a wide‐spread
distribution in the North Atlantic Ocean, yet little is known about the diversity of its intestinal …

[HTML][HTML] Feed Regime Slightly Modifies the Bacterial but Not the Fungal Communities in the Intestinal Mucosal Microbiota of Cobia Fish (Rachycentron canadum)

S Reinoso, MS Gutiérrez, A Reyes-Jara, M Toro… - Microorganisms, 2023 - mdpi.com
The bacterial community of the intestinal microbiota influences many host functions, and
similar effects have been recently reported for the fungal community (mycobiota). Cobia is a …

Analyses of diet preference of larval orange-spotted grouper (Epinephelus coioides) grown under inorganic fertilization method using next-generation sequencing

J Kuo, CY Chen, CC Han, YM Ju, KS Tew - Aquaculture, 2021 - Elsevier
Orange-spotted grouper (Epinephelus coioides) is one of the most important aquaculture
species in tropical and subtropical Asia. Traditionally, rotifer are fed to the larvae after they …