Transforming medical imaging with Transformers? A comparative review of key properties, current progresses, and future perspectives

J Li, J Chen, Y Tang, C Wang, BA Landman… - Medical image …, 2023 - Elsevier
Transformer, one of the latest technological advances of deep learning, has gained
prevalence in natural language processing or computer vision. Since medical imaging bear …

Loss odyssey in medical image segmentation

J Ma, J Chen, M Ng, R Huang, Y Li, C Li, X Yang… - Medical Image …, 2021 - Elsevier
The loss function is an important component in deep learning-based segmentation methods.
Over the past five years, many loss functions have been proposed for various segmentation …

Segment anything in medical images

J Ma, Y He, F Li, L Han, C You, B Wang - Nature Communications, 2024 - nature.com
Medical image segmentation is a critical component in clinical practice, facilitating accurate
diagnosis, treatment planning, and disease monitoring. However, existing methods, often …

Segment anything model for medical image analysis: an experimental study

MA Mazurowski, H Dong, H Gu, J Yang, N Konz… - Medical Image …, 2023 - Elsevier
Training segmentation models for medical images continues to be challenging due to the
limited availability of data annotations. Segment Anything Model (SAM) is a foundation …

Segment anything model for medical images?

Y Huang, X Yang, L Liu, H Zhou, A Chang, X Zhou… - Medical Image …, 2024 - Elsevier
Abstract The Segment Anything Model (SAM) is the first foundation model for general image
segmentation. It has achieved impressive results on various natural image segmentation …

Medmnist v2-a large-scale lightweight benchmark for 2d and 3d biomedical image classification

J Yang, R Shi, D Wei, Z Liu, L Zhao, B Ke, H Pfister… - Scientific Data, 2023 - nature.com
We introduce MedMNIST v2, a large-scale MNIST-like dataset collection of standardized
biomedical images, including 12 datasets for 2D and 6 datasets for 3D. All images are pre …

Clip-driven universal model for organ segmentation and tumor detection

J Liu, Y Zhang, JN Chen, J Xiao, Y Lu… - Proceedings of the …, 2023 - openaccess.thecvf.com
An increasing number of public datasets have shown a marked impact on automated organ
segmentation and tumor detection. However, due to the small size and partially labeled …

Domain adaptation for medical image analysis: a survey

H Guan, M Liu - IEEE Transactions on Biomedical Engineering, 2021 - ieeexplore.ieee.org
Machine learning techniques used in computer-aided medical image analysis usually suffer
from the domain shift problem caused by different distributions between source/reference …

nnU-Net: a self-configuring method for deep learning-based biomedical image segmentation

F Isensee, PF Jaeger, SAA Kohl, J Petersen… - Nature …, 2021 - nature.com
Biomedical imaging is a driver of scientific discovery and a core component of medical care
and is being stimulated by the field of deep learning. While semantic segmentation …

A review of deep-learning-based medical image segmentation methods

X Liu, L Song, S Liu, Y Zhang - Sustainability, 2021 - mdpi.com
As an emerging biomedical image processing technology, medical image segmentation has
made great contributions to sustainable medical care. Now it has become an important …