[HTML][HTML] Recent advances on phylogenomics of gymnosperms and a new classification

Y Yang, DK Ferguson, B Liu, KS Mao, LM Gao… - Plant diversity, 2022 - Elsevier
Living gymnosperms comprise four major groups: cycads, Ginkgo, conifers, and
gnetophytes. Relationships among/within these lineages have not been fully resolved. Next …

Long-distance dispersal of fungi

JJ Golan, A Pringle - Microbiology spectrum, 2017 - Am Soc Microbiol
Dispersal is a fundamental biological process, operating at multiple temporal and spatial
scales. Despite an increasing understanding of fungal biodiversity, most research on fungal …

The number of tree species on Earth

R Cazzolla Gatti, PB Reich… - Proceedings of the …, 2022 - National Acad Sciences
One of the most fundamental questions in ecology is how many species inhabit the Earth.
However, due to massive logistical and financial challenges and taxonomic difficulties …

The rise of angiosperms pushed conifers to decline during global cooling

FL Condamine, D Silvestro… - Proceedings of the …, 2020 - National Acad Sciences
Competition among species and entire clades can impact species diversification and
extinction, which can shape macroevolutionary patterns. The fossil record shows successive …

Gene duplications and phylogenomic conflict underlie major pulses of phenotypic evolution in gymnosperms

GW Stull, XJ Qu, C Parins-Fukuchi, YY Yang, JB Yang… - Nature Plants, 2021 - nature.com
Inferring the intrinsic and extrinsic drivers of species diversification and phenotypic disparity
across the tree of life is a major challenge in evolutionary biology. In green plants, polyploidy …

Bayesian estimation of the global biogeographical history of the Solanaceae

J Dupin, NJ Matzke, T Särkinen, S Knapp… - Journal of …, 2017 - Wiley Online Library
Abstract Aim The tomato family Solanaceae is distributed on all major continents except
Antarctica and has its centre of diversity in South America. Its worldwide distribution …

Maximum likelihood inference of geographic range evolution by dispersal, local extinction, and cladogenesis

RH Ree, SA Smith - Systematic biology, 2008 - academic.oup.com
In historical biogeography, model-based inference methods for reconstructing the evolution
of geographic ranges on phylogenetic trees are poorly developed relative to the diversity of …

Reconciling fossils with phylogenies reveals the origin and macroevolutionary processes explaining the global cycad biodiversity

M Coiro, R Allio, N Mazet, LJ Seyfullah… - New …, 2023 - Wiley Online Library
The determinants of biodiversity patterns can be understood using macroevolutionary
analyses. The integration of fossils into phylogenies offers a deeper understanding of …

Origin and diversification of living cycads: a cautionary tale on the impact of the branching process prior in Bayesian molecular dating

FL Condamine, NS Nagalingum, CR Marshall… - BMC evolutionary …, 2015 - Springer
Background Bayesian relaxed-clock dating has significantly influenced our understanding of
the timeline of biotic evolution. This approach requires the use of priors on the branching …

Global determinants of zoogeographical boundaries

GF Ficetola, F Mazel, W Thuiller - Nature ecology & evolution, 2017 - nature.com
The distribution of living organisms on Earth is spatially structured. Early biogeographers
identified the existence of multiple zoogeographical regions, characterized by faunas with …