The advent of next-generation sequencing (NGS) technologies has expanded our ability to
detect and analyze microbial genomes and has yielded novel molecular approaches for …

Emerging infectious diseases (EIDs) pose an increasingly significant global burden, driven
by urbanization, population explosion, global travel, changes in human behavior, and …

Abstract In 2021, the H5N1 virus lineage 2.3. 4.4 b spread to the Americas, causing high
mortality in wild and domestic avian populations. South American countries along the Pacific …

Quantitative polymerase chain reaction (PCR) and genome sequencing are important
methods for wastewater surveillance of severe acute respiratory syndrome coronavirus 2 …

A large gap remains between sequencing a microbial community and characterizing all of
the organisms inside of it. Here we develop a novel method to taxonomically bin …

Human enterovirus causes various clinical manifestations in the form of rashes, febrile
illness, flu-like illness, uveitis, hand–foot–mouth disease (HFMD), herpangina, meningitis …

Next-generation sequencing (NGS) has revolutionized clinical microbiology, particularly in
diagnosing respiratory infectious diseases and conducting epidemiological investigations …

Crimean-Congo haemorrhagic fever (CCHF) is the most prevalent human tick-borne viral
disease, endemic to the Balkans, Africa, Middle East and Asia. There are currently no …

Coronaviruses (CoVs) are highly contagious viruses in humans, pets, and wild animals.
SARS-CoV-2, a novel CoV caused severe pandemic known as COVID-19. Mutations in the …

Understanding the evolutionary patterns and geographic spread of SARS-CoV-2 variants,
particularly Omicron, is essential for effective public health responses. This study focused on …