CAFE: a software suite for analysis of paired-sample transposon insertion sequencing data
A Abramova, A Osińska, H Kunche, E Burman… - …, 2021 - academic.oup.com
Sequencing of transposon insertion libraries is used to determine the relative fitness of
individual mutants at a large scale. However, there is a lack of tools for specifically analyzing …
individual mutants at a large scale. However, there is a lack of tools for specifically analyzing …
PIMMS (Pragmatic Insertional Mutation Mapping System) Laboratory Methodology a Readily Accessible Tool for Identification of Essential Genes in Streptococcus
The Pragmatic Insertional Mutation Mapping (PIMMS) laboratory protocol was developed
alongside various bioinformatics packages to enable detection of essential and conditionally …
alongside various bioinformatics packages to enable detection of essential and conditionally …
PIMMS-Dash: Accessible analysis, interrogation, and visualisation of high-throughput transposon insertion sequencing (TIS) data
AM Blanchard, A Taylor, A Warry, F Shephard… - bioRxiv, 2024 - biorxiv.org
Motivation: Current methods for visualising and interrogating high-throughput transposon
insertion mutagenesis sequencing (TIS) data requires a significant time investment in …
insertion mutagenesis sequencing (TIS) data requires a significant time investment in …
Using Genome Scale Mutant Libraries to Identify Essential Genes
KS Myers, P Behari Lal, DR Noguera… - Essential Genes and …, 2022 - Springer
Identification of essential genes is key to understanding the required processes and gene
products of organisms under one or more conditions. Transposon sequencing (Tn-seq) has …
products of organisms under one or more conditions. Transposon sequencing (Tn-seq) has …
[PDF][PDF] Identification of potential therapeutic targets for Streptococcus suis infection
B Jeffreys - 2021 - core.ac.uk
Streptococcus (S.) suis is a commensal porcine pathogen that is the leading causative agent
of bacterial meningitis and sepsis in young pigs globally. Systemic infection in swine is …
of bacterial meningitis and sepsis in young pigs globally. Systemic infection in swine is …
[PDF][PDF] Analyse, clonage et transplantation du génome de la bactérie Mesoplasma florum
V Baby - 2017 - savoirs.usherbrooke.ca
Grâce aux progrès de la synthèse et de l'assemblage d'ADN, il est maintenant possible de
créer des génomes complètement différents de ceux retrouvés dans la nature. Il sera bientôt …
créer des génomes complètement différents de ceux retrouvés dans la nature. Il sera bientôt …
New Genomics Tools and Strategies for Studying Antibiotics and Antibiotic-Resistance in Staphylococcus Aureus
MJ Santiago - 2016 - dash.harvard.edu
Staphylococcus aureus is a gram positive coccoid pathogen that causes intractable
infections in hospitals and communities around the world, and tens of thousands of people …
infections in hospitals and communities around the world, and tens of thousands of people …