Metabolites as signalling molecules

SA Baker, J Rutter - Nature reviews molecular cell Biology, 2023 - nature.com
Traditional views of cellular metabolism imply that it is passively adapted to meet the
demands of the cell. It is becoming increasingly clear, however, that metabolites do more …

Functional properties of the mitochondrial carrier system

EB Taylor - Trends in cell biology, 2017 - cell.com
The mitochondrial carrier system (MCS) transports small molecules between mitochondria
and the cytoplasm. It is integral to the core mitochondrial function to regulate cellular …

Protein-metabolite interactomics of carbohydrate metabolism reveal regulation of lactate dehydrogenase

KG Hicks, AA Cluntun, HL Schubert, SR Hackett… - Science, 2023 - science.org
Metabolic networks are interconnected and influence diverse cellular processes. The protein-
metabolite interactions that mediate these networks are frequently low affinity and …

Systematic identification of allosteric protein-metabolite interactions that control enzyme activity in vivo

H Link, K Kochanowski, U Sauer - Nature biotechnology, 2013 - nature.com
Recent data suggest that the majority of proteins bind specific metabolites, and that such
interactions are relevant to metabolic and gene regulation,,. However, there are no methods …

[HTML][HTML] Genome-scale architecture of small molecule regulatory networks and the fundamental trade-off between regulation and enzymatic activity

E Reznik, D Christodoulou, JE Goldford, E Briars… - Cell reports, 2017 - cell.com
Metabolic flux is in part regulated by endogenous small molecules that modulate the
catalytic activity of an enzyme, eg, allosteric inhibition. In contrast to transcriptional …

Post-translational events and modifications regulating plant enzymes involved in isoprenoid precursor biosynthesis

A Hemmerlin - Plant Science, 2013 - Elsevier
Identification of regulatory enzymes is fundamental for engineering metabolic pathways
such as the isoprenoid one. All too often, investigation of gene expression remains the major …

Systematic mapping of protein‐metabolite interactions in central metabolism of Escherichia coli

M Diether, Y Nikolaev, FHT Allain… - Molecular systems …, 2019 - embopress.org
Metabolite binding to proteins regulates nearly all cellular processes, but our knowledge of
these interactions originates primarily from empirical in vitro studies. Here, we report the first …

Metabolic engineering of Bacillus subtilis fueled by systems biology: recent advances and future directions

Y Liu, J Li, G Du, J Chen, L Liu - Biotechnology advances, 2017 - Elsevier
By combining advanced omics technology and computational modeling, systems biologists
have identified and inferred thousands of regulatory events and system-wide interactions of …

[HTML][HTML] Cooperative cobinding of synthetic and natural ligands to the nuclear receptor PPARγ

J Shang, R Brust, SA Mosure, J Bass, P Munoz-Tello… - Elife, 2018 - elifesciences.org
Crystal structures of peroxisome proliferator-activated receptor gamma (PPARγ) have
revealed overlapping binding modes for synthetic and natural/endogenous ligands …

Renaissance of allostery to disrupt protein kinase interactions

AE Leroux, RM Biondi - Trends in Biochemical Sciences, 2020 - cell.com
Protein–protein interactions often regulate the activity of protein kinases by allosterically
modulating the conformation of the ATP-binding site. Bidirectional allostery implies that …