Mining museums for historical DNA: advances and challenges in museomics
CJ Raxworthy, BT Smith - Trends in Ecology & Evolution, 2021 - cell.com
Historical DNA (hDNA), obtained from museum and herbarium specimens, has yielded
spectacular new insights into the history of organisms. This includes documenting historical …
spectacular new insights into the history of organisms. This includes documenting historical …
The Genome 10K Project: a way forward
KP Koepfli, B Paten… - Annu. Rev. Anim …, 2015 - annualreviews.org
The Genome 10K Project was established in 2009 by a consortium of biologists and
genome scientists determined to facilitate the sequencing and analysis of the complete …
genome scientists determined to facilitate the sequencing and analysis of the complete …
Global sea turtle conservation successes
AD Mazaris, G Schofield, C Gkazinou… - Science …, 2017 - science.org
We document a tendency for published estimates of population size in sea turtles to be
increasing rather than decreasing across the globe. To examine the population status of the …
increasing rather than decreasing across the globe. To examine the population status of the …
The broiler chicken as a signal of a human reconfigured biosphere
Changing patterns of human resource use and food consumption have profoundly impacted
the Earth's biosphere. Until now, no individual taxa have been suggested as distinct and …
the Earth's biosphere. Until now, no individual taxa have been suggested as distinct and …
On the importance of being structured: instantaneous coalescence rates and human evolution—lessons for ancestral population size inference?
Most species are structured and influenced by processes that either increased or reduced
gene flow between populations. However, most population genetic inference methods …
gene flow between populations. However, most population genetic inference methods …
Using genomic data to infer historic population dynamics of nonmodel organisms
AC Beichman, E Huerta-Sanchez… - Annual Review of …, 2018 - annualreviews.org
Genome sequence data are now being routinely obtained from many nonmodel organisms.
These data contain a wealth of information about the demographic history of the populations …
These data contain a wealth of information about the demographic history of the populations …
[PDF][PDF] MSMC and MSMC2: the multiple sequentially markovian coalescent
S Schiffels, K Wang - Statistical population genomics, 2020 - library.oapen.org
Abstract The Multiple Sequentially Markovian Coalescent (MSMC) is a population genetic
method and software for inferring demographic history and population structure through time …
method and software for inferring demographic history and population structure through time …
Quantifying temporal genomic erosion in endangered species
Many species have undergone dramatic population size declines over the past centuries.
Although stochastic genetic processes during and after such declines are thought to elevate …
Although stochastic genetic processes during and after such declines are thought to elevate …
The use of museum specimens with high-throughput DNA sequencers
Natural history collections have long been used by morphologists, anatomists, and
taxonomists to probe the evolutionary process and describe biological diversity. These …
taxonomists to probe the evolutionary process and describe biological diversity. These …
The impact of purifying and background selection on the inference of population history: problems and prospects
Current procedures for inferring population history generally assume complete neutrality—
that is, they neglect both direct selection and the effects of selection on linked sites. We here …
that is, they neglect both direct selection and the effects of selection on linked sites. We here …