Emerging applications of machine learning in genomic medicine and healthcare

N Chafai, L Bonizzi, S Botti… - Critical Reviews in Clinical …, 2024 - Taylor & Francis
The integration of artificial intelligence technologies has propelled the progress of clinical
and genomic medicine in recent years. The significant increase in computing power has …

A boosted SVM classifier trained by incremental learning and decremental unlearning approach

R Kashef - Expert Systems with Applications, 2021 - Elsevier
Abstract The Support Vector Machines (SVM) classifier is a margin-based supervised
machine learning method used for categorization and classification tasks. A Linear SVM …

Machine learning strategies in microRNA research: bridging genome to phenome

S Daniel Thomas, K Vijayakumar, L John… - OMICS: A Journal of …, 2024 - liebertpub.com
MicroRNAs (miRNAs) have emerged as a prominent layer of regulation of gene expression.
This article offers the salient and current aspects of machine learning (ML) tools and …

An ensemble soft weighted gene selection-based approach and cancer classification using modified metaheuristic learning

N Tavasoli, K Rezaee, M Momenzadeh… - Journal of …, 2021 - academic.oup.com
Hybrid algorithms are effective methods for solving optimization problems that rarely have
been used in the gene selection procedure. This paper introduces a novel modified model …

miRNAFold: a web server for fast miRNA precursor prediction in genomes

C Tav, S Tempel, L Poligny, F Tahi - Nucleic acids research, 2016 - academic.oup.com
Computational methods are required for prediction of non-coding RNAs (ncRNAs), which
are involved in many biological processes, especially at post-transcriptional level. Among …

Parametrized division of exposure zone for marine reinforced concrete structures with a multi-class Boosting method

R Wu, J Xia, J Chen, K Chen, Y Zheng, J Mao… - Engineering …, 2023 - Elsevier
The analysis of marine reinforced concrete structures using chloride profile data is a
commonly used exposure zone classification method. However, chloride profile data is multi …

Deep recurrent neural network-based identification of precursor micrornas

S Park, S Min, HS Choi, S Yoon - Advances in Neural …, 2017 - proceedings.neurips.cc
MicroRNAs (miRNAs) are small non-coding ribonucleic acids (RNAs) which play key roles in
post-transcriptional gene regulation. Direct identification of mature miRNAs is infeasible due …

Multi-branch convolutional neural network for identification of small non-coding RNA genomic loci

GK Georgakilas, A Grioni, KG Liakos, E Chalupova… - Scientific reports, 2020 - nature.com
Genomic regions that encode small RNA genes exhibit characteristic patterns in their
sequence, secondary structure, and evolutionary conservation. Convolutional Neural …

Computational resources for prediction and analysis of functional miRNA and their targetome

I Monga, M Kumar - Computational Biology of Non-Coding RNA: Methods …, 2019 - Springer
Abstract microRNAs are evolutionarily conserved, endogenously produced, noncoding
RNAs (ncRNAs) of approximately 19–24 nucleotides (nts) in length known to exhibit gene …

Computational prediction of functional microRNA–mRNA interactions

MD Saçar Demirci, M Yousef, J Allmer - … of Non-Coding RNA: Methods and …, 2019 - Springer
Proteins have a strong influence on the phenotype and their aberrant expression leads to
diseases. MicroRNAs (miRNAs) are short RNA sequences which posttranscriptionally …