Linkage disequilibrium and association studies in higher plants: present status and future prospects

PK Gupta, S Rustgi, PL Kulwal - Plant molecular biology, 2005 - Springer
During the last two decades, DNA-based molecular markers have been extensively utilized
for a variety of studies in both plant and animal systems. One of the major uses of these …

Association study designs for complex diseases

LR Cardon, JI Bell - Nature Reviews Genetics, 2001 - nature.com
Assessing the association between DNA variants and disease has been used widely to
identify regions of the genome and candidate genes that contribute to disease. However …

MM algorithms for generalized Bradley-Terry models

DR Hunter - The annals of statistics, 2004 - projecteuclid.org
The Bradley-Terry model for paired comparisons is a simple and much-studied means to
describe the probabilities of the possible outcomes when individuals are judged against one …

[HTML][HTML] The cardiac mechanical stretch sensor machinery involves a Z disc complex that is defective in a subset of human dilated cardiomyopathy

R Knöll, M Hoshijima, HM Hoffman, V Person… - Cell, 2002 - cell.com
Muscle cells respond to mechanical stretch stimuli by triggering downstream signals for
myocyte growth and survival. The molecular components of the muscle stretch sensor are …

Genetic association studies: design, analysis and interpretation

CM Lewis - Briefings in bioinformatics, 2002 - academic.oup.com
This paper provides a review of the design and analysis of genetic association studies. In
case control studies, the different contingency tables and their relationships to the …

The Bayesian revolution in genetics

MA Beaumont, B Rannala - Nature Reviews Genetics, 2004 - nature.com
Bayesian statistics allow scientists to easily incorporate prior knowledge into their data
analysis. Nonetheless, the sheer amount of computational power that is required for …

Cytokine gene polymorphism in human disease: on-line databases

J Bidwell, L Keen, G Gallagher, R Kimberly… - Genes & …, 1999 - nature.com
The pathologies of many infectious, autoimmune and malignant diseases are influenced by
the profiles of cytokine production in pro-inflammatory (TH1) and anti-inflammatory (TH2) T …

Pedigree disequilibrium tests for multilocus haplotypes

F Dudbridge - Genetic Epidemiology: The Official Publication of …, 2003 - Wiley Online Library
Association tests of multilocus haplotypes are of interest both in linkage disequilibrium
mapping and in candidate gene studies. For case‐parent trios, I discuss the extension of …

Application of association mapping to understanding the genetic diversity of plant germplasm resources

IY Abdurakhmonov… - International journal of …, 2008 - Wiley Online Library
Compared to the conventional linkage mapping, linkage disequilibrium (LD)‐mapping,
using the nonrandom associations of loci in haplotypes, is a powerful high‐resolution …

The TDT and other family-based tests for linkage disequilibrium and association.

RS Spielman, WJ Ewens - American journal of human genetics, 1996 - ncbi.nlm.nih.gov
The transmission/disequilibrium test (TDT) was introduced several years ago by Spielman et
al.(1993) as a test for linkage between a complex disease and a genetic marker. The …