Epistasis and evolution: recent advances and an outlook for prediction
As organisms evolve, the effects of mutations change as a result of epistatic interactions with
other mutations accumulated along the line of descent. This can lead to shifts in adaptability …
other mutations accumulated along the line of descent. This can lead to shifts in adaptability …
Environment-independent distribution of mutational effects emerges from microscopic epistasis
Predicting how new mutations alter phenotypes is difficult because mutational effects vary
across genotypes and environments. Recently discovered global epistasis, in which the …
across genotypes and environments. Recently discovered global epistasis, in which the …
Fitness effects of mutations throughout evolution
H Ertl - Nature Reviews Genetics, 2024 - nature.com
Fitness effects of mutations throughout evolution | Nature Reviews Genetics Skip to main
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Evolution of evolvability in rapidly adapting populations
JT Ferrare, BH Good - Nature Ecology & Evolution, 2024 - nature.com
Mutations can alter the short-term fitness of an organism, as well as the rates and benefits of
future mutations. While numerous examples of these evolvability modifiers have been …
future mutations. While numerous examples of these evolvability modifiers have been …
Patterns of Fitness and Gene Expression Epistasis Generated by Beneficial Mutations in the rho and rpoB Genes of Escherichia coli during High-Temperature …
A González-González, TN Batarseh… - Molecular Biology …, 2024 - academic.oup.com
Epistasis is caused by genetic interactions among mutations that affect fitness. To
characterize properties and potential mechanisms of epistasis, we engineered eight double …
characterize properties and potential mechanisms of epistasis, we engineered eight double …
Effects of periodic bottlenecks on the dynamics of adaptive evolution in microbial populations
M Izutsu, DM Lake, ZWD Matson, JP Dodson… - …, 2024 - microbiologyresearch.org
Population bottlenecks can impact the rate of adaptation in evolving populations. On the one
hand, each bottleneck reduces the genetic variation that fuels adaptation. On the other hand …
hand, each bottleneck reduces the genetic variation that fuels adaptation. On the other hand …
The distribution of fitness effects during adaptive walks using a simple genetic network
NLV O'Brien, B Holland, J Engelstädter… - PLoS …, 2024 - journals.plos.org
The tempo and mode of adaptation depends on the availability of beneficial alleles. Genetic
interactions arising from gene networks can restrict this availability. However, the extent to …
interactions arising from gene networks can restrict this availability. However, the extent to …
Linking Molecular Mechanisms to their Evolutionary Consequences: a primer
A major obstacle to predictive understanding of evolution stems from the complexity of
biological systems, which prevents detailed characterization of key evolutionary properties …
biological systems, which prevents detailed characterization of key evolutionary properties …
Resolving deleterious and near-neutral effects requires different pooled fitness assay designs
Pooled sequencing-based fitness assays are a powerful and widely used approach to
quantifying fitness of thousands of genetic variants in parallel. Despite the throughput of …
quantifying fitness of thousands of genetic variants in parallel. Despite the throughput of …
The distribution of beneficial mutational effects between two sister yeast species poorly explains natural outcomes of vineyard adaptation
ER Longan, JC Fay - Genetics, 2024 - academic.oup.com
Domesticated strains of Saccharomyces cerevisiae have adapted to resist copper and
sulfite, two chemical stressors commonly used in winemaking. S. paradoxus has not …
sulfite, two chemical stressors commonly used in winemaking. S. paradoxus has not …