Diffusion models in medical imaging: A comprehensive survey

A Kazerouni, EK Aghdam, M Heidari, R Azad… - Medical Image …, 2023 - Elsevier
Denoising diffusion models, a class of generative models, have garnered immense interest
lately in various deep-learning problems. A diffusion probabilistic model defines a forward …

Diffusion models for medical image analysis: A comprehensive survey

A Kazerouni, EK Aghdam, M Heidari, R Azad… - arXiv preprint arXiv …, 2022 - arxiv.org
Denoising diffusion models, a class of generative models, have garnered immense interest
lately in various deep-learning problems. A diffusion probabilistic model defines a forward …

A massive 7T fMRI dataset to bridge cognitive neuroscience and artificial intelligence

EJ Allen, G St-Yves, Y Wu, JL Breedlove… - Nature …, 2022 - nature.com
Extensive sampling of neural activity during rich cognitive phenomena is critical for robust
understanding of brain function. Here we present the Natural Scenes Dataset (NSD), in …

[HTML][HTML] Specialized astrocytes mediate glutamatergic gliotransmission in the CNS

R de Ceglia, A Ledonne, DG Litvin, BL Lind, G Carriero… - Nature, 2023 - nature.com
Multimodal astrocyte–neuron communications govern brain circuitry assembly and function.
For example, through rapid glutamate release, astrocytes can control excitability, plasticity …

MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation

JD Tournier, R Smith, D Raffelt, R Tabbara… - Neuroimage, 2019 - Elsevier
MRtrix3 is an open-source, cross-platform software package for medical image processing,
analysis and visualisation, with a particular emphasis on the investigation of the brain using …

[HTML][HTML] Quantitative mapping of the brain's structural connectivity using diffusion MRI tractography: A review

F Zhang, A Daducci, Y He, S Schiavi, C Seguin… - Neuroimage, 2022 - Elsevier
Diffusion magnetic resonance imaging (dMRI) tractography is an advanced imaging
technique that enables in vivo reconstruction of the brain's white matter connections at …

[HTML][HTML] Automated synapse-level reconstruction of neural circuits in the larval zebrafish brain

F Svara, D Förster, F Kubo, M Januszewski… - Nature …, 2022 - nature.com
Dense reconstruction of synaptic connectivity requires high-resolution electron microscopy
images of entire brains and tools to efficiently trace neuronal wires across the volume. To …

Harmonization of multi-site diffusion tensor imaging data

JP Fortin, D Parker, B Tunç, T Watanabe, MA Elliott… - Neuroimage, 2017 - Elsevier
Diffusion tensor imaging (DTI) is a well-established magnetic resonance imaging (MRI)
technique used for studying microstructural changes in the white matter. As with many other …

[HTML][HTML] TractSeg-Fast and accurate white matter tract segmentation

J Wasserthal, P Neher, KH Maier-Hein - NeuroImage, 2018 - Elsevier
The individual course of white matter fiber tracts is an important factor for analysis of white
matter characteristics in healthy and diseased brains. Diffusion-weighted MRI tractography …

QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data

M Cieslak, PA Cook, X He, FC Yeh, T Dhollander… - Nature …, 2021 - nature.com
Diffusion-weighted magnetic resonance imaging (dMRI) is the primary method for
noninvasively studying the organization of white matter in the human brain. Here we …