Control of tissue development by morphogens

A Kicheva, J Briscoe - Annual review of cell and developmental …, 2023 - annualreviews.org
Intercellular signaling molecules, known as morphogens, act at a long range in developing
tissues to provide spatial information and control properties such as cell fate and tissue …

[HTML][HTML] Better together: how cooperativity influences transcriptional bursting

C Fountas, TL Lenstra - Current Opinion in Genetics & Development, 2024 - Elsevier
Transcriptional bursting refers to the stochastic transition of a promoter between
transcriptionally active and inactive states. This dynamic process is highly regulated by the …

Topologically constrained fluctuations and thermodynamics regulate nonequilibrium response

G Fernandes Martins, JM Horowitz - Physical Review E, 2023 - APS
The limits on a system's response to external perturbations inform our understanding of how
physical properties can be shaped by microscopic characteristics. Here, we derive …

[HTML][HTML] Recent approaches lead to a deeper understanding of diverse segmentation mechanisms in insects, with a focus on the pair-rule genes

K Reding, L Pick - Current Opinion in Insect Science, 2024 - Elsevier
Highlights•Technical innovations allow live imaging of transcriptional dynamics in
embryos.•Digging deeper brought new insights into Drosophila gene regulation and …

Revisiting bicoid function: complete inactivation reveals an additional fundamental role in Drosophila egg geometry specification

S Baumgartner - Hereditas, 2024 - Springer
Introduction The bicoid (bcd) gene in Drosophila has served as a paradigm for a morphogen
in textbooks for decades. Discovered in 1986 as a mutation affecting anterior development …

Optimizing information transmission in neural induction constrains cell surface contacts of ascidian embryos

R Bettoni, G Dupont, AM Walczak, S de Buyl - arXiv preprint arXiv …, 2024 - arxiv.org
The onset of neural induction in the anterior ectoderm of ascidian embryos is regulated at
the extracellular level by FGF signaling molecules, which control the acquisition of neural …

Both the transcriptional activator, Bcd, and repressor, Cic, form small mobile oligomeric clusters

L Zhang, L Hodgins, S Sakib, A Verbeem… - Biophysical …, 2024 - cell.com
Transcription factors play an essential role in pattern formation during early embryo
development, generating a strikingly fast and precise transcriptional response that results in …

Bicoid-nucleosome competition sets a concentration threshold for transcription constrained by genome replication

EA Degen, C Croslyn, NM Mangan, SA Blythe - bioRxiv, 2024 - biorxiv.org
Transcription factors (TFs) regulate gene expression despite constraints from chromatin
structure and the cell cycle. Here we examine the concentration-dependent regulation of …

Quantum mechanics predicts Bicoid interpretation times of less than a second

I Lone - bioRxiv, 2024 - biorxiv.org
The establishment and interpretation of the concentration distribution of the morphogen
Bicoid (Bcd) is considered crucial for the successful embryonic development of fruit flies …

Regulating the timing of enhancer transitions is key to defining sharp boundaries of Fushi tarazu expression in the Drosophila embryo

A Birnie, A Plat, JP Bothma - bioRxiv, 2022 - biorxiv.org
Coordinating the action of different enhancers is crucial to correctly specify cell fate
decisions during development. Yet it remains poorly understood how the activity of multiple …