Using neutral, selected, and hitchhiker loci to assess connectivity of marine populations in the genomic era

PA Gagnaire, T Broquet, D Aurelle… - Evolutionary …, 2015 - Wiley Online Library
Estimating the rate of exchange of individuals among populations is a central concern to
evolutionary ecology and its applications to conservation and management. For instance …

Analysis of population genomic data from hybrid zones

Z Gompert, EG Mandeville… - Annual Review of Ecology …, 2017 - annualreviews.org
Hybrid zones provide a powerful opportunity to analyze ecological and evolutionary
interactions between divergent lineages. As such, research on hybrid zones has played a …

Chromosomal inversion polymorphisms shape the genomic landscape of deer mice

OS Harringmeyer, HE Hoekstra - Nature Ecology & Evolution, 2022 - nature.com
Chromosomal inversions are an important form of structural variation that can affect
recombination, chromosome structure and fitness. However, because inversions can be …

A chromosomal inversion contributes to divergence in multiple traits between deer mouse ecotypes

ER Hager, OS Harringmeyer, TB Wooldridge, S Theingi… - Science, 2022 - science.org
How locally adapted ecotypes are established and maintained within a species is a long-
standing question in evolutionary biology. Using forest and prairie ecotypes of deer mice …

Mass of genes rather than master genes underlie the genomic architecture of amphibian speciation

C Dufresnes, A Brelsford, DL Jeffries… - Proceedings of the …, 2021 - National Acad Sciences
The genetic architecture of speciation, ie, how intrinsic genomic incompatibilities promote
reproductive isolation (RI) between diverging lineages, is one of the best-kept secrets of …

The multispecies coalescent over-splits species in the case of geographically widespread taxa

EA Chambers, DM Hillis - Systematic Biology, 2020 - academic.oup.com
Many recent species delimitation studies rely exclusively on limited analyses of genetic data
analyzed under the multispecies coalescent (MSC) model, and results from these studies …

Transitions between phases of genomic differentiation during stick-insect speciation

R Riesch, M Muschick, D Lindtke, R Villoutreix… - Nature ecology & …, 2017 - nature.com
Speciation can involve a transition from a few genetic loci that are resistant to gene flow to
genome-wide differentiation. However, only limited data exist concerning this transition and …

[HTML][HTML] A Darwinian laboratory of multiple contact zones

K Johannesson, A Le Moan, S Perini… - Trends in Ecology & …, 2020 - cell.com
Barriers to gene flow between divergent populations result in contact (hybrid) zones.
Locations where multiple contact zones overlap can be used in comparative studies asking …

Clines on the seashore: The genomic architecture underlying rapid divergence in the face of gene flow

AM Westram, M Rafajlović, P Chaube, R Faria… - Evolution …, 2018 - academic.oup.com
Adaptive divergence and speciation may happen despite opposition by gene flow.
Identifying the genomic basis underlying divergence with gene flow is a major task in …

Multiple chromosomal rearrangements in a hybrid zone between Littorina saxatilis ecotypes

R Faria, P Chaube, HE Morales, T Larsson… - Molecular …, 2019 - Wiley Online Library
Both classical and recent studies suggest that chromosomal inversion polymorphisms are
important in adaptation and speciation. However, biases in discovery and reporting of …