N-degron and C-degron pathways of protein degradation

A Varshavsky - Proceedings of the National Academy of …, 2019 - National Acad Sciences
This perspective is partly review and partly proposal. N-degrons and C-degrons are
degradation signals whose main determinants are, respectively, the N-terminal and C …

Structure, dynamics and function of the 26S proteasome

Y Mao - Macromolecular protein complexes III: structure and …, 2021 - Springer
The 26S proteasome is the most complex ATP-dependent protease machinery, of~ 2.5 MDa
mass, ubiquitously found in all eukaryotes. It selectively degrades ubiquitin-conjugated …

Ubiquitin recognition by the proteasome

Y Saeki - The journal of biochemistry, 2017 - academic.oup.com
The 26S proteasome is a 2.5-MDa complex responsible for the selective, ATP-dependent
degradation of ubiquitylated proteins in eukaryotic cells. Substrates in hundreds cellular …

Structure and function of the AAA+ ATPase p97/Cdc48p

D Xia, WK Tang, Y Ye - Gene, 2016 - Elsevier
Abstract p97 (also known as valosin-containing protein (VCP) in mammals or Cdc48p in
Saccharomyces cerevisiae) is an evolutionarily conserved ATPase present in all eukaryotes …

In vivo ubiquitin linkage-type analysis reveals that the Cdc48-Rad23/Dsk2 axis contributes to K48-linked chain specificity of the proteasome

H Tsuchiya, F Ohtake, N Arai, A Kaiho, S Yasuda… - Molecular cell, 2017 - cell.com
Ubiquitin-binding domain (UBD) proteins regulate numerous cellular processes, but their
specificities toward ubiquitin chain types in cells remain obscure. Here, we perform a …

Proteomic profiling of VCP substrates links VCP to K6‐linked ubiquitylation and c‐Myc function

JB Heidelberger, A Voigt, ME Borisova, G Petrosino… - EMBO …, 2018 - embopress.org
Valosin‐containing protein (VCP) is an evolutionarily conserved ubiquitin‐dependent ATP
ase that mediates the degradation of proteins through the ubiquitin–proteasome pathway …

The Cdc48 unfoldase prepares well-folded protein substrates for degradation by the 26S proteasome

MM Olszewski, C Williams, KC Dong… - Communications …, 2019 - nature.com
Cdc48/p97 is an essential and highly conserved AAA+ ATPase that uses its protein-
unfoldase activity to extract ubiquitinated polypeptides from macromolecular complexes and …

Ring of change: CDC48/p97 drives protein dynamics at chromatin

A Franz, L Ackermann, T Hoppe - Frontiers in genetics, 2016 - frontiersin.org
The dynamic composition of proteins associated with nuclear DNA is a fundamental property
of chromosome biology. In the chromatin compartment dedicated protein complexes govern …

AAA-ATPases in protein degradation

RS Yedidi, P Wendler, C Enenkel - Frontiers in molecular biosciences, 2017 - frontiersin.org
Proteolytic machineries containing multisubunit protease complexes and AAA-ATPases play
a key role in protein quality control and the regulation of protein homeostasis. In these …

AAA+ ATPases in protein degradation: structures, functions and mechanisms

S Zhang, Y Mao - Biomolecules, 2020 - mdpi.com
Adenosine triphosphatases (ATPases) associated with a variety of cellular activities (AAA+),
the hexameric ring-shaped motor complexes located in all ATP-driven proteolytic machines …