[HTML][HTML] Long non-coding RNAs: definitions, functions, challenges and recommendations
Genes specifying long non-coding RNAs (lncRNAs) occupy a large fraction of the genomes
of complex organisms. The term 'lncRNAs' encompasses RNA polymerase I (Pol I), Pol II …
of complex organisms. The term 'lncRNAs' encompasses RNA polymerase I (Pol I), Pol II …
piRNA biogenesis in the germline: From transcription of piRNA genomic sources to piRNA maturation
S Hirakata, MC Siomi - Biochimica et Biophysica Acta (BBA)-Gene …, 2016 - Elsevier
PIWI-interacting RNAs (piRNAs) are small non-coding RNAs enriched in animal gonads
where they repress transposons to maintain genome integrity. Because of the highly tissue …
where they repress transposons to maintain genome integrity. Because of the highly tissue …
Multiple LINEs of retrotransposon silencing mechanisms in the mammalian germline
F Yang, PJ Wang - Seminars in cell & developmental biology, 2016 - Elsevier
Retrotransposons play an important role in genome evolution but pose acute challenges to
host genome integrity, particularly in early stage germ cells where epigenetic control is …
host genome integrity, particularly in early stage germ cells where epigenetic control is …
[HTML][HTML] Multi-omic analysis elucidates the genetic basis of hydrocephalus
We conducted PrediXcan analysis of hydrocephalus risk in ten neurological tissues and
whole blood. Decreased expression of MAEL in the brain was significantly associated …
whole blood. Decreased expression of MAEL in the brain was significantly associated …
The DNA binding high mobility group box protein family functionally binds RNA
DJ Hamilton, AE Hein, DS Wuttke… - Wiley Interdisciplinary …, 2023 - Wiley Online Library
Nucleic acid binding proteins regulate transcription, splicing, RNA stability, RNA localization,
and translation, together tailoring gene expression in response to stimuli. Upon discovery …
and translation, together tailoring gene expression in response to stimuli. Upon discovery …
[HTML][HTML] Retrotransposon LINE-1 bodies in the cytoplasm of piRNA-deficient mouse spermatocytes: Ribonucleoproteins overcoming the integrated stress response
Transposable elements (TE) are mobile DNA sequences whose excessive proliferation
endangers the host. Although animals have evolved robust TE-targeting defenses, including …
endangers the host. Although animals have evolved robust TE-targeting defenses, including …
[HTML][HTML] Alternate roles of sox transcription factors beyond transcription initiation
Y Zhang, L Hou - International Journal of Molecular Sciences, 2021 - mdpi.com
Sox proteins are known as crucial transcription factors for many developmental processes
and for a wide range of common diseases. They were believed to specifically bind and bend …
and for a wide range of common diseases. They were believed to specifically bind and bend …
[HTML][HTML] Protein-based condensation mechanisms drive the assembly of RNA-rich P granules
Germ granules are protein-RNA condensates that segregate with the embryonic germline. In
Caenorhabditis elegans embryos, germ (P) granule assembly requires MEG-3, an …
Caenorhabditis elegans embryos, germ (P) granule assembly requires MEG-3, an …
The DNA-Binding High-Mobility Group Box Domain of Sox Family Proteins Directly Interacts with RNA In Vitro
There is a growing body of evidence that a substantial number of protein domains identified
as DNA-binding also interact with RNA to regulate biological processes. Several recent …
as DNA-binding also interact with RNA to regulate biological processes. Several recent …