Correlation and association analyses are one of the most widely used statistical methods in
research fields, including microbiome and integrative multiomics studies. Correlation and …

A decade after environmental scientists integrated high‐throughput sequencing
technologies in their toolbox, the genomics‐based monitoring of anthropogenic impacts on …

Microbial communities play important roles in all ecosystems and yet a comprehensive
understanding of the ecological processes governing the assembly of these communities is …

Background Soil microbial communities are major drivers of cycling of soil nutrients that
sustain plant growth and productivity. Yet, a holistic understanding of the impact of land-use …

Background Microbes typically live in communities where individuals can interact with each
other in numerous ways. However, knowledge on the importance of these interactions is …

The tree seed mycobiome has received little attention despite its potential role in forest
regeneration and health. The aim of the present study was to analyze the processes shaping …

Background Ticks transmit pathogens of medical and veterinary importance and are an
increasing threat to human and animal health. Assessing disease risk and developing new …

Joint Species Distribution Models (JSDM) provide a general multivariate framework to study
the joint abundances of all species from a community. JSDM account for both structuring …

Background High-throughput transcriptomic datasets are often examined to discover new
actors and regulators of a biological response. To this end, graphical interfaces have been …

European grapevine is a complex holobiont composed of two plant genomes, that of the
scion (Vitis vinifera L.) and the rootstock (Vitis spp.), and a multitude of microbial genomes …