Biolink Model: A universal schema for knowledge graphs in clinical, biomedical, and translational science
Within clinical, biomedical, and translational science, an increasing number of projects are
adopting graphs for knowledge representation. Graph‐based data models elucidate the …
adopting graphs for knowledge representation. Graph‐based data models elucidate the …
Human housekeeping genes are compact
E Eisenberg, EY Levanon - TRENDS in Genetics, 2003 - cell.com
We identify a set of 575 human genes that are expressed in all conditions tested in a publicly
available database of microarray results. Based on this common occurrence, the set is …
available database of microarray results. Based on this common occurrence, the set is …
[HTML][HTML] Information fusion as an integrative cross-cutting enabler to achieve robust, explainable, and trustworthy medical artificial intelligence
Medical artificial intelligence (AI) systems have been remarkably successful, even
outperforming human performance at certain tasks. There is no doubt that AI is important to …
outperforming human performance at certain tasks. There is no doubt that AI is important to …
A deep-learning system bridging molecule structure and biomedical text with comprehension comparable to human professionals
To accelerate biomedical research process, deep-learning systems are developed to
automatically acquire knowledge about molecule entities by reading large-scale biomedical …
automatically acquire knowledge about molecule entities by reading large-scale biomedical …
The SARS-CoV-2 RNA Interactome
SARS-CoV-2 is an RNA virus whose success as a pathogen relies on its abilities to
repurpose host RNA-binding proteins (RBPs) and to evade antiviral RBPs. To uncover the …
repurpose host RNA-binding proteins (RBPs) and to evade antiviral RBPs. To uncover the …
Cytoscape: software for visualization and analysis of biological networks
Substantial progress has been made in the field of “omics” research (eg, Genomics,
Transcriptomics, Proteomics, and Metabolomics), leading to a vast amount of biological …
Transcriptomics, Proteomics, and Metabolomics), leading to a vast amount of biological …
Cytoscape: a software environment for integrated models of biomolecular interaction networks
Cytoscape is an open source software project for integrating biomolecular interaction
networks with high-throughput expression data and other molecular states into a unified …
networks with high-throughput expression data and other molecular states into a unified …
OrthoMCL: identification of ortholog groups for eukaryotic genomes
L Li, CJ Stoeckert, DS Roos - Genome research, 2003 - genome.cshlp.org
The identification of orthologous groups is useful for genome annotation, studies on
gene/protein evolution, comparative genomics, and the identification of taxonomically …
gene/protein evolution, comparative genomics, and the identification of taxonomically …
[HTML][HTML] Prediction of mammalian microRNA targets
BP Lewis, I Shih, MW Jones-Rhoades, DP Bartel… - Cell, 2003 - cell.com
MicroRNAs (miRNAs) can play important gene regulatory roles in nematodes, insects, and
plants by basepairing to mRNAs to specify posttranscriptional repression of these …
plants by basepairing to mRNAs to specify posttranscriptional repression of these …
The Gene Ontology (GO) database and informatics resource
Gene Ontology Consortium - Nucleic acids research, 2004 - academic.oup.com
Abstract The Gene Ontology (GO) project (http://www. geneontology. org/) provides
structured, controlled vocabularies and classifications that cover several domains of …
structured, controlled vocabularies and classifications that cover several domains of …