Life and death in the soil microbiome: how ecological processes influence biogeochemistry

NW Sokol, E Slessarev, GL Marschmann… - Nature Reviews …, 2022 - nature.com
Soil microorganisms shape global element cycles in life and death. Living soil
microorganisms are a major engine of terrestrial biogeochemistry, driving the turnover of soil …

Keystone taxa as drivers of microbiome structure and functioning

S Banerjee, K Schlaeppi… - Nature Reviews …, 2018 - nature.com
Microorganisms have a pivotal role in the functioning of ecosystems. Recent studies have
shown that microbial communities harbour keystone taxa, which drive community …

Climate warming enhances microbial network complexity and stability

MM Yuan, X Guo, L Wu, YA Zhang, N Xiao… - Nature Climate …, 2021 - nature.com
Unravelling the relationships between network complexity and stability under changing
climate is a challenging topic in theoretical ecology that remains understudied in the field of …

microeco: an R package for data mining in microbial community ecology

C Liu, Y Cui, X Li, M Yao - FEMS microbiology ecology, 2021 - academic.oup.com
ABSTRACT A large amount of sequencing data is produced in microbial community ecology
studies using the high-throughput sequencing technique, especially amplicon-sequencing …

[HTML][HTML] Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities

C Gao, L Xu, L Montoya, M Madera… - Nature …, 2022 - nature.com
Plant response to drought stress involves fungi and bacteria that live on and in plants and in
the rhizosphere, yet the stability of these myco-and micro-biomes remains poorly …

[HTML][HTML] Low shifts in salinity determined assembly processes and network stability of microeukaryotic plankton communities in a subtropical urban reservoir

Y Mo, F Peng, X Gao, P Xiao, R Logares, E Jeppesen… - Microbiome, 2021 - Springer
Background Freshwater salinization may result in significant changes of microbial
community composition and diversity, with implications for ecosystem processes and …

[HTML][HTML] Fungal-bacterial diversity and microbiome complexity predict ecosystem functioning

C Wagg, K Schlaeppi, S Banerjee, EE Kuramae… - Nature …, 2019 - nature.com
The soil microbiome is highly diverse and comprises up to one quarter of Earth's diversity.
Yet, how such a diverse and functionally complex microbiome influences ecosystem …

From energy to (soil organic) matter

A Gunina, Y Kuzyakov - Global change biology, 2022 - Wiley Online Library
In this concept paper, we propose a new view on soil organic matter (SOM) formation:
microorganisms use most of the organics entering the soil as energy rather than as a source …

[HTML][HTML] Ecological stability of microbial communities in Lake Donghu regulated by keystone taxa

S Liu, H Yu, Y Yu, J Huang, Z Zhou, J Zeng, P Chen… - Ecological …, 2022 - Elsevier
Seasonal variations of environmental factors generally result in considerable changes in
microbiomes, yet we still lack a clear understanding of how microbial communities maintain …

Soil microbial network complexity predicts ecosystem function along elevation gradients on the Tibetan Plateau

W Chen, J Wang, X Chen, Z Meng, R Xu… - Soil Biology and …, 2022 - Elsevier
The contributions of soil microbial diversity for the multifunctionality of ecosystem functions
remain little understood despite the well-known importance of soil microbial communities for …