[PDF][PDF] Metabolomics and isotope tracing

C Jang, L Chen, JD Rabinowitz - Cell, 2018 - cell.com
Great strides have been made over the past decade toward comprehensive study of
metabolism. Mass spectrometry (MS) has played a central role by enabling measurement of …

[PDF][PDF] Bacterial metabolism and antibiotic efficacy

JM Stokes, AJ Lopatkin, MA Lobritz, JJ Collins - Cell metabolism, 2019 - cell.com
Antibiotics target energy-consuming processes. As such, perturbations to bacterial metabolic
homeostasis are significant consequences of treatment. Here, we describe three postulates …

Metabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community

S Blasche, Y Kim, RAT Mars, D Machado… - Nature …, 2021 - nature.com
Microbial communities often undergo intricate compositional changes yet also maintain
stable coexistence of diverse species. The mechanisms underlying long-term coexistence …

[PDF][PDF] L-arginine modulates T cell metabolism and enhances survival and anti-tumor activity

R Geiger, JC Rieckmann, T Wolf, C Basso, Y Feng… - Cell, 2016 - cell.com
Metabolic activity is intimately linked to T cell fate and function. Using high-resolution mass
spectrometry, we generated dynamic metabolome and proteome profiles of human primary …

Toward merging untargeted and targeted methods in mass spectrometry-based metabolomics and lipidomics

T Cajka, O Fiehn - Analytical chemistry, 2016 - ACS Publications
Advances in mass spectrometry (MS) and data processing have led to discoveries in
regulation of cellular metabolism by using metabolomics and lipidomics approaches. 1, 2 …

Metabolomics: a primer

X Liu, JW Locasale - Trends in biochemical sciences, 2017 - cell.com
Metabolomics generates a profile of small molecules that are derived from cellular
metabolism and can directly reflect the outcome of complex networks of biochemical …

[HTML][HTML] Metabolic pathways in T cell activation and lineage differentiation

L Almeida, M Lochner, L Berod, T Sparwasser - Seminars in immunology, 2016 - Elsevier
Recent advances in the field of immunometabolism support the concept that fundamental
processes in T cell biology, such as TCR-mediated activation and T helper lineage …

Metabolite measurement: pitfalls to avoid and practices to follow

W Lu, X Su, MS Klein, IA Lewis, O Fiehn… - Annual review of …, 2017 - annualreviews.org
Metabolites are the small biological molecules involved in energy conversion and
biosynthesis. Studying metabolism is inherently challenging due to metabolites' reactivity …

Next-generation mass spectrometry metabolomics revives the functional analysis of plant metabolic diversity

D Li, E Gaquerel - Annual Review of Plant Biology, 2021 - annualreviews.org
The remarkable diversity of specialized metabolites produced by plants has inspired several
decades of research and nucleated a long list of theories to guide empirical ecological …

Observation of universal ageing dynamics in antibiotic persistence

Y Kaplan, S Reich, E Oster, S Maoz, I Levin-Reisman… - Nature, 2021 - nature.com
Stress responses allow cells to adapt to changes in external conditions by activating specific
pathways. Here we investigate the dynamics of single cells that were subjected to acute …