Genomic epidemiology of the SARS-CoV-2 epidemic in Brazil
The high numbers of COVID-19 cases and deaths in Brazil have made Latin America an
epicentre of the pandemic. SARS-CoV-2 established sustained transmission in Brazil early …
epicentre of the pandemic. SARS-CoV-2 established sustained transmission in Brazil early …
Pathogens in space: Advancing understanding of pathogen dynamics and disease ecology through landscape genetics
Landscape genetics has provided many insights into how heterogeneous landscape
features drive processes influencing spatial genetic variation in free‐living organisms. This …
features drive processes influencing spatial genetic variation in free‐living organisms. This …
Phylodynamic approaches to studying avian influenza virus
Avian influenza viruses can cause severe disease in domestic and wild birds and are a
pandemic threat. Phylodynamics is the study of how epidemiological, evolutionary, and …
pandemic threat. Phylodynamics is the study of how epidemiological, evolutionary, and …
Explaining the geographic spread of emerging epidemics: a framework for comparing viral phylogenies and environmental landscape data
S Dellicour, R Rose, OG Pybus - BMC bioinformatics, 2016 - Springer
Background Phylogenetic analysis is now an important tool in the study of viral outbreaks. It
can reconstruct epidemic history when surveillance epidemiology data are sparse, and can …
can reconstruct epidemic history when surveillance epidemiology data are sparse, and can …
Bluetongue virus spread in Europe is a consequence of climatic, landscape and vertebrate host factors as revealed by phylogeographic inference
Spatio-temporal patterns of the spread of infectious diseases are commonly driven by
environmental and ecological factors. This is particularly true for vector-borne diseases …
environmental and ecological factors. This is particularly true for vector-borne diseases …
[HTML][HTML] Wild waterfowl migration and domestic duck density shape the epidemiology of highly pathogenic H5N8 influenza in the Republic of Korea
SC Hill, YJ Lee, BM Song, HM Kang, EK Lee… - Infection, Genetics and …, 2015 - Elsevier
Highly pathogenic avian influenza (HPAI) viruses threaten human and animal health yet
their emergence is poorly understood, partly because sampling of the HPAI Asian-origin …
their emergence is poorly understood, partly because sampling of the HPAI Asian-origin …
Elucidating the phylodynamics of endemic rabies virus in eastern Africa using whole-genome sequencing
Many of the pathogens perceived to pose the greatest risk to humans are viral zoonoses,
responsible for a range of emerging and endemic infectious diseases. Phylogeography is a …
responsible for a range of emerging and endemic infectious diseases. Phylogeography is a …
Ecogeographic drivers of the spatial spread of highly pathogenic avian influenza outbreaks in Europe and the United States, 2016–Early 2022
JD Gass Jr, NJ Hill, L Damodaran… - International Journal of …, 2023 - mdpi.com
H5Nx highly pathogenic avian influenza (HPAI) viruses of clade 2.3. 4.4 have caused
outbreaks in Europe among wild and domestic birds since 2016 and were introduced to …
outbreaks in Europe among wild and domestic birds since 2016 and were introduced to …
Phylodynamic and phylogeographic reconstruction of porcine reproductive and respiratory syndrome virus (PRRSV) in Europe: patterns and determinants
G Franzo, G Faustini, M Legnardi… - Transboundary and …, 2022 - Wiley Online Library
Porcine reproductive and respiratory syndrome (PRRS) is among the most devastating
diseases affecting the pig industry. Despite vaccines having been available for decades, the …
diseases affecting the pig industry. Despite vaccines having been available for decades, the …
Disentangling the role of poultry farms and wild birds in the spread of highly pathogenic avian influenza virus in Europe
Abstract In winter 2016–7, Europe was severely hit by an unprecedented epidemic of highly
pathogenic avian influenza viruses (HPAIVs), causing a significant impact on animal health …
pathogenic avian influenza viruses (HPAIVs), causing a significant impact on animal health …