[HTML][HTML] Breeding schemes for the implementation of genomic selection in wheat (Triticum spp.)

FM Bassi, AR Bentley, G Charmet, R Ortiz, J Crossa - Plant Science, 2016 - Elsevier
In the last decade the breeding technology referred to as 'genomic selection'(GS) has been
implemented in a variety of species, with particular success in animal breeding. Recent …

Genomic prediction in animals and plants: simulation of data, validation, reporting, and benchmarking

HD Daetwyler, MPL Calus, R Pong-Wong… - Genetics, 2013 - academic.oup.com
The genomic prediction of phenotypes and breeding values in animals and plants has
developed rapidly into its own research field. Results of genomic prediction studies are often …

[HTML][HTML] Application of high-dimensional feature selection: evaluation for genomic prediction in man

ML Bermingham, R Pong-Wong, A Spiliopoulou… - Scientific reports, 2015 - nature.com
In this study, we investigated the effect of five feature selection approaches on the
performance of a mixed model (G-BLUP) and a Bayesian (Bayes C) prediction method. We …

Genomic selection accuracy using multifamily prediction models in a wheat breeding program

EL Heffner, JL Jannink, ME Sorrells - The Plant Genome, 2011 - Wiley Online Library
Genomic selection (GS) uses genome‐wide molecular marker data to predict the genetic
value of selection candidates in breeding programs. In plant breeding, the ability to produce …

[HTML][HTML] Genomic prediction of host resistance to sea lice in farmed Atlantic salmon populations

HY Tsai, A Hamilton, AE Tinch, DR Guy… - Genetics Selection …, 2016 - Springer
Background Sea lice have significant negative economic and welfare impacts on marine
Atlantic salmon farming. Since host resistance to sea lice has a substantial genetic …

Will genomic selection be a practical method for plant breeding?

A Nakaya, SN Isobe - Annals of botany, 2012 - academic.oup.com
Background Genomic selection or genome-wide selection (GS) has been highlighted as a
new approach for marker-assisted selection (MAS) in recent years. GS is a form of MAS that …

[HTML][HTML] Reliability of direct genomic values for animals with different relationships within and to the reference population

M Pszczola, T Strabel, HA Mulder, MPL Calus - Journal of dairy science, 2012 - Elsevier
Accuracy of genomic selection depends on the accuracy of prediction of single nucleotide
polymorphism effects and the proportion of genetic variance explained by markers. Design …

Breeding better cultivars, faster: applications of new technologies for the rapid deployment of superior horticultural tree crops

S van Nocker, SE Gardiner - Horticulture Research, 2014 - academic.oup.com
Woody perennial plants, including trees that produce fruits and nuts of horticultural value,
typically have long breeding cycles, and development and introduction of improved cultivars …

[HTML][HTML] Accuracy of multi-trait genomic selection using different methods

MPL Calus, RF Veerkamp - Genetics Selection Evolution, 2011 - Springer
Background Genomic selection has become a very important tool in animal genetics and is
rapidly emerging in plant genetics. It holds the promise to be particularly beneficial to select …

[HTML][HTML] Genomic Selection for Fruit Quality Traits in Apple (Malus×domestica Borkh.)

S Kumar, D Chagné, MCAM Bink, RK Volz… - PloS one, 2012 - journals.plos.org
The genome sequence of apple (Malus× domestica Borkh.) was published more than a year
ago, which helped develop an 8K SNP chip to assist in implementing genomic selection …