Single-molecule localization microscopy

M Lelek, MT Gyparaki, G Beliu, F Schueder… - Nature reviews …, 2021 - nature.com
Single-molecule localization microscopy (SMLM) describes a family of powerful imaging
techniques that dramatically improve spatial resolution over standard, diffraction-limited …

Switchable fluorophores for single-molecule localization microscopy

H Li, JC Vaughan - Chemical reviews, 2018 - ACS Publications
The past decade has witnessed an explosion in the use of super-resolution fluorescence
microscopy methods in biology and other fields. Single-molecule localization microscopy …

Super-resolution fight club: assessment of 2D and 3D single-molecule localization microscopy software

D Sage, TA Pham, H Babcock, T Lukes, T Pengo… - Nature …, 2019 - nature.com
With the widespread uptake of two-dimensional (2D) and three-dimensional (3D) single-
molecule localization microscopy (SMLM), a large set of different data analysis packages …

Quantitative mapping and minimization of super-resolution optical imaging artifacts

S Culley, D Albrecht, C Jacobs, PM Pereira… - Nature …, 2018 - nature.com
Super-resolution microscopy depends on steps that can contribute to the formation of image
artifacts, leading to misinterpretation of biological information. We present NanoJ …

Artifact-free high-density localization microscopy analysis

RJ Marsh, K Pfisterer, P Bennett, LM Hirvonen… - Nature …, 2018 - nature.com
High-density analysis methods for localization microscopy increase acquisition speed but
produce artifacts. We demonstrate that these artifacts can be eliminated by the combination …

Chemical analysis of single cells

PE Oomen, MA Aref, I Kaya, NTN Phan… - Analytical …, 2018 - ACS Publications
Heterogeneity in cell populations is a phenomenon encountered in virtually all biological
systems, in whole tissues and cell cultures and from bacterial to mammalian cells. Moreover …

A machine learning approach for online automated optimization of super-resolution optical microscopy

A Durand, T Wiesner, MA Gardner, LÉ Robitaille… - Nature …, 2018 - nature.com
Traditional approaches for finding well-performing parameterizations of complex imaging
systems, such as super-resolution microscopes rely on an extensive exploration phase over …

Genome-wide determination of on-target and off-target characteristics for RNA-guided DNA methylation by dCas9 methyltransferases

L Lin, Y Liu, F Xu, J Huang, TF Daugaard… - …, 2018 - academic.oup.com
Background Fusion of DNA methyltransferase domains to the nuclease-deficient clustered
regularly interspaced short palindromic repeat (CRISPR) associated protein 9 (dCas9) has …

Template-free 2D particle fusion in localization microscopy

H Heydarian, F Schueder, MT Strauss… - Nature …, 2018 - nature.com
Methods that fuse multiple localization microscopy images of a single structure can improve
signal-to-noise ratio and resolution, but they generally suffer from template bias or sensitivity …

Fluorescent protein-based indicators for functional super-resolution imaging of biomolecular activities in living cells

K Lu, CQ Vu, T Matsuda, T Nagai - International journal of molecular …, 2019 - mdpi.com
Super-resolution light microscopy (SRM) offers a unique opportunity for diffraction-unlimited
imaging of biomolecular activities in living cells. To realize such potential, genetically …