One health relationships between human, animal, and environmental microbiomes: a mini-review

P Trinh, JR Zaneveld, S Safranek… - Frontiers in public …, 2018 - frontiersin.org
The One Health concept stresses the ecological relationships between human, animal, and
environmental health. Much of the One Health literature to date has examined the transfer of …

Evolving trends in next-generation probiotics: a 5W1H perspective

D Almeida, D Machado, JC Andrade… - Critical reviews in …, 2020 - Taylor & Francis
In recent years, scientific community has been gathering increasingly more insight on the
dynamics that are at play in metabolic and inflammatory disorders. These rapidly growing …

Deciphering functional redundancy in the human microbiome

L Tian, XW Wang, AK Wu, Y Fan, J Friedman… - Nature …, 2020 - nature.com
Although the taxonomic composition of the human microbiome varies tremendously across
individuals, its gene composition or functional capacity is highly conserved—implying an …

Microbial community assembly in wild populations of the fruit fly Drosophila melanogaster

KL Adair, M Wilson, A Bost, AE Douglas - The ISME journal, 2018 - academic.oup.com
Animals are routinely colonized by microorganisms. Despite many studies documenting the
microbial taxa associated with animals, the pattern and ecological determinants of among …

An ecological framework to understand the efficacy of fecal microbiota transplantation

Y Xiao, MT Angulo, S Lao, ST Weiss, YY Liu - Nature communications, 2020 - nature.com
Human gut microbiota plays critical roles in physiology and disease. Our understanding of
ecological principles that govern the dynamics and resilience of this highly complex …

Species deletions from microbiome consortia reveal key metabolic interactions between gut microbes

N Gutiérrez, D Garrido - MSystems, 2019 - Am Soc Microbiol
The gut microbiome is a complex microbial community that plays a key role in human health.
Diet is an important factor dictating gut microbiome composition. This is mediated by multiple …

Heavy metal contamination collapses trophic interactions in the soil microbial food web via bottom-up regulation

X Wang, Z Dai, J Lin, H Zhao, H Yu, B Ma, L Hu… - Soil Biology and …, 2023 - Elsevier
The soil microbial food web plays a vital role in soil health, nutrient cycling and agricultural
productivity. Notably, there is a distinct paucity of information regarding the effects of heavy …

Walking ecosystems in microbiome-inspired green infrastructure: an ecological perspective on enhancing personal and planetary health

JM Robinson, JG Mills, MF Breed - Challenges, 2018 - mdpi.com
Principles of ecology apply at myriad scales, including within the human body and the
intertwined macro and microscopic ecosystems that we depend upon for survival. The …

Large covariance estimation for compositional data via composition-adjusted thresholding

Y Cao, W Lin, H Li - Journal of the American Statistical Association, 2019 - Taylor & Francis
High-dimensional compositional data arise naturally in many applications such as
metagenomic data analysis. The observed data lie in a high-dimensional simplex, and …

Novel probiotics and prebiotics: how can they help in human gut microbiota dysbiosis?

CGÃ Gallego, S Salminen - Applied Food Biotechnology, 2016 - journals.sbmu.ac.ir
Abstract Background and Objectives: Novel probiotics and prebiotics designed to modulate
the gut microbiota for improving health outcomes are in demand as the importance of the gut …