Phase transitions of associative biomacromolecules

RV Pappu, SR Cohen, F Dar, M Farag, M Kar - Chemical Reviews, 2023 - ACS Publications
Multivalent proteins and nucleic acids, collectively referred to as multivalent associative
biomacromolecules, provide the driving forces for the formation and compositional …

The physics of protein self-assembly

JJ McManus, P Charbonneau, E Zaccarelli… - Current opinion in colloid …, 2016 - Elsevier
Understanding protein self-assembly is important for many biological and industrial
processes. Proteins can self-assemble into crystals, filaments, gels, and other amorphous …

Colloidal fibers and rings by cooperative assembly

JS Oh, S Lee, SC Glotzer, GR Yi, DJ Pine - Nature communications, 2019 - nature.com
Janus colloids with one attractive patch on an otherwise repulsive particle surface serve as
model systems to explore structure formation of particles with chemically heterogeneous …

CAMELOT: A machine learning approach for coarse-grained simulations of aggregation of block-copolymeric protein sequences

KM Ruff, TS Harmon, RV Pappu - The Journal of chemical physics, 2015 - pubs.aip.org
We report the development and deployment of a coarse-graining method that is well suited
for computer simulations of aggregation and phase separation of protein sequences with …

Self-assembly of “Mickey Mouse” shaped colloids into tube-like structures: experiments and simulations

JR Wolters, G Avvisati, F Hagemans, T Vissers, DJ Kraft… - Soft Matter, 2015 - pubs.rsc.org
The self-assembly of anisotropic patchy particles with a triangular shape was studied by
experiments and computer simulations. The colloidal particles were synthesized in a two …

Equilibrium phases of one-patch colloids with short-range attractions

Z Preisler, T Vissers, G Munao, F Smallenburg… - Soft Matter, 2014 - pubs.rsc.org
Inspired by experimental studies of short-ranged attractive patchy particles, we study with
computer simulations the phase behavior and the crystalline structures of one-patch colloids …

Clustering of asymmetric dumbbell-shaped silica/polystyrene nanoparticles by solvent-induced self-assembly

W Li, S Ravaine, E Duguet - Journal of colloid and interface science, 2020 - Elsevier
We report a quite simple strategy to assemble silica/polystyrene dumbbell-shaped
nanoparticles into clusters with an aggregation number from two to more than 30. The …

Multivalent patchy colloids for quantitative 3D self-assembly studies

M Kamp, B De Nijs, MN Van Der Linden, I De Feijter… - Langmuir, 2020 - ACS Publications
We report methods to synthesize sub-micron-and micron-sized patchy silica particles with
fluorescently labeled hemispherical titania protrusions, as well as routes to efficiently …

Key aspects of the past 30 years of protein design

GM Meconi, IR Sasselli, V Bianco… - Reports on Progress …, 2022 - iopscience.iop.org
Proteins are the workhorse of life. They are the building infrastructure of living systems; they
are the most efficient molecular machines known, and their enzymatic activity is still …

Crystals of Janus colloids at various interaction ranges

Z Preisler, T Vissers, F Smallenburg… - The Journal of Chemical …, 2016 - pubs.aip.org
We investigate the effect of interaction range on the phase behaviour of Janus particles with
a Kern-Frenkel potential. Specifically, we study interaction ranges Δ= 0.1σ, 0.3σ, 0.4σ, 0.5σ …