[HTML][HTML] Methodology for fish biodiversity monitoring with environmental DNA metabarcoding: The primers, databases and bioinformatic pipelines
Environmental DNA (eDNA) originates from cellular material shed by organisms into aquatic
or terrestrial environments and can be sampled and monitored using metabarcoding …
or terrestrial environments and can be sampled and monitored using metabarcoding …
Integrating eDNA metabarcoding and simultaneous underwater visual surveys to describe complex fish communities in a marine biodiversity hotspot
T Valdivia‐Carrillo, A Rocha‐Olivares… - Molecular Ecology …, 2021 - Wiley Online Library
Marine biodiversity can be surveyed using underwater visual censuses and recently with
eDNA metabarcoding. Although a promising tool, eDNA studies have shown contrasting …
eDNA metabarcoding. Although a promising tool, eDNA studies have shown contrasting …
A molecular‐based identification resource for the arthropods of Finland
To associate specimens identified by molecular characters to other biological knowledge,
we need reference sequences annotated by Linnaean taxonomy. In this study, we (1) report …
we need reference sequences annotated by Linnaean taxonomy. In this study, we (1) report …
Comparison of markers for the monitoring of freshwater benthic biodiversity through DNA metabarcoding
Metabarcoding of bulk or environmental DNA has great potential for biomonitoring of
freshwater environments. However, successful application of metabarcoding to biodiversity …
freshwater environments. However, successful application of metabarcoding to biodiversity …
Arthropods are kin: Operationalizing Indigenous data sovereignty to respectfully utilize genomic data from Indigenous lands
L Hutchins, A Mc Cartney, N Graham… - Molecular Ecology …, 2023 - Wiley Online Library
Indigenous peoples have cultivated biodiverse agroecosystems since time immemorial. The
rise of metagenomics and high‐throughput sequencing technologies in biodiversity studies …
rise of metagenomics and high‐throughput sequencing technologies in biodiversity studies …
Ecological network structure in response to community assembly processes over evolutionary time
The dynamic structure of ecological communities results from interactions among taxa that
change with shifts in species composition in space and time. However, our ability to study …
change with shifts in species composition in space and time. However, our ability to study …
Environmental DNA methods for biosecurity and invasion biology in terrestrial ecosystems: Progress, pitfalls, and prospects
Abstract Analysis of environmental DNA (eDNA) enables indirect detection of species
without the need to directly observe and sample them. For biosecurity and invasion biology …
without the need to directly observe and sample them. For biosecurity and invasion biology …
Richness and resilience in the Pacific: DNA metabarcoding enables parallelized evaluation of biogeographic patterns
S Kennedy, J Calaor, Y Zurápiti, J Hans… - Molecular …, 2023 - Wiley Online Library
Islands make up a large proportion of Earth's biodiversity, yet are also some of the most
sensitive systems to environmental perturbation. Biogeographic theory predicts that geologic …
sensitive systems to environmental perturbation. Biogeographic theory predicts that geologic …
Taxonomy and biological control: new challenges in an old relationship
Biological control and taxonomy are continuously developing fields with remarkable impacts
on society. At least 80 years of literature have documented this relationship, which remains …
on society. At least 80 years of literature have documented this relationship, which remains …
Community assembly and metaphylogeography of soil biodiversity: Insights from haplotype‐level community DNA metabarcoding within an oceanic island
Most of our understanding of island diversity comes from the study of aboveground systems,
while the patterns and processes of diversification and community assembly for …
while the patterns and processes of diversification and community assembly for …