[HTML][HTML] Rhizobiome engineering: Unveiling complex rhizosphere interactions to enhance plant growth and health

M del Carmen Orozco-Mosqueda, AE Fadiji… - Microbiological …, 2022 - Elsevier
Crop plants are affected by a series of inhibitory environmental and biotic factors that
decrease their growth and production. To counteract these adverse effects, plants work …

Pseudomonas genomes: diverse and adaptable

MW Silby, C Winstanley, SAC Godfrey… - FEMS microbiology …, 2011 - academic.oup.com
Members of the genus Pseudomonas inhabit a wide variety of environments, which is
reflected in their versatile metabolic capacity and broad potential for adaptation to fluctuating …

[HTML][HTML] Plasmid fitness costs are caused by specific genetic conflicts enabling resolution by compensatory mutation

JPJ Hall, RCT Wright, E Harrison, KJ Muddiman… - PLoS …, 2021 - journals.plos.org
Plasmids play an important role in bacterial genome evolution by transferring genes
between lineages. Fitness costs associated with plasmid carriage are expected to be a …

[HTML][HTML] Plant growth promotion induced by phosphate solubilizing endophytic Pseudomonas isolates

N Oteino, RD Lally, S Kiwanuka, A Lloyd… - Frontiers in …, 2015 - frontiersin.org
The use of plant growth promoting bacterial inoculants as live microbial biofertilizers
provides a promising alternative to chemical fertilizers and pesticides. Inorganic phosphate …

The current status on the taxonomy of Pseudomonas revisited: an update

A Peix, MH Ramírez-Bahena, E Velázquez - Infection, Genetics and …, 2018 - Elsevier
The genus Pseudomonas described in 1894 is one of the most diverse and ubiquitous
bacterial genera which encompass species isolated worldwide. In the last years more than …

[HTML][HTML] Comparative Genomics of Plant-Associated Pseudomonas spp.: Insights into Diversity and Inheritance of Traits Involved in Multitrophic Interactions

JE Loper, KA Hassan, DV Mavrodi, EW Davis… - PLoS …, 2012 - journals.plos.org
We provide here a comparative genome analysis of ten strains within the Pseudomonas
fluorescens group including seven new genomic sequences. These strains exhibit a diverse …

Microbiology, genomics, and clinical significance of the Pseudomonas fluorescens species complex, an unappreciated colonizer of humans

BS Scales, RP Dickson, JJ LiPuma… - Clinical microbiology …, 2014 - Am Soc Microbiol
Pseudomonas fluorescens is not generally considered a bacterial pathogen in humans;
however, multiple culture-based and culture-independent studies have identified it at low …

[HTML][HTML] Differential growth responses of soil bacterial taxa to carbon substrates of varying chemical recalcitrance

KC Goldfarb, U Karaoz, CA Hanson… - Frontiers in …, 2011 - frontiersin.org
Soils are immensely diverse microbial habitats with thousands of co-existing bacterial,
archaeal, and fungal species. Across broad spatial scales, factors such as pH and soil …

Cooperative virulence via the collective action of secreted pathogen effectors

T Ruiz-Bedoya, PW Wang, D Desveaux… - Nature …, 2023 - nature.com
Although virulence is typically attributed to single pathogenic strains, here we investigated
whether effectors secreted by a population of non-virulent strains could function as public …

PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategies

S Akhter, RK Aziz, RA Edwards - Nucleic acids research, 2012 - academic.oup.com
Prophages are phages in lysogeny that are integrated into, and replicated as part of, the
host bacterial genome. These mobile elements can have tremendous impact on their …