Self-diffusion coefficient of bulk and confined water: a critical review of classical molecular simulation studies

IN Tsimpanogiannis, OA Moultos, LFM Franco… - Molecular …, 2019 - Taylor & Francis
We present a detailed overview of classical molecular simulation studies examining the self-
diffusion coefficient of water. The self-diffusion coefficient is directly associated with the …

Molecular simulations of liquid and supercritical water: Thermodynamics, structure, and hydrogen bonding

AG Kalinichev - Reviews in Mineralogy and …, 2001 - pubs.geoscienceworld.org
Water is a truly unique substance in many respects. It is the only chemical compound that
naturally occurs in all three physical states (solid, liquid and vapor) under the …

Flexible simple point-charge water model with improved liquid-state properties

Y Wu, HL Tepper, GA Voth - The Journal of chemical physics, 2006 - pubs.aip.org
In order to introduce flexibility into the simple point-charge (SPC) water model, the impact of
the intramolecular degrees of freedom on liquid properties was systematically studied in this …

Competing quantum effects in the dynamics of a flexible water model

S Habershon, TE Markland… - The journal of chemical …, 2009 - pubs.aip.org
Numerous studies have identified large quantum mechanical effects in the dynamics of
liquid water. In this paper, we suggest that these effects may have been overestimated due …

A systematic study of water models for molecular simulation: derivation of water models optimized for use with a reaction field

D Van der Spoel, PJ Van Maaren… - The Journal of chemical …, 1998 - pubs.aip.org
We have performed long molecular dynamics simulations of water using four popular water
models, namely simple point charge (SPC), extended simple point charge (SPC/E), and the …

Calibration and testing of a water model for simulation of the molecular dynamics of proteins and nucleic acids in solution

M Levitt, M Hirshberg, R Sharon… - The Journal of …, 1997 - ACS Publications
The objective of this work is to obtain a water model for simulations of biological
macromolecules in solution. A pragmatic approach is taken in which we use the same type …

Carbon nanotubes in water: structural characteristics and energetics

JH Walther, R Jaffe, T Halicioglu… - The Journal of …, 2001 - ACS Publications
We study the structural properties of water surrounding a carbon nanotube using molecular
dynamics simulations. The interaction potentials involve a description of the carbon …

A flexible model for water based on TIP4P/2005

MA González, JLF Abascal - The Journal of chemical physics, 2011 - pubs.aip.org
A new flexible water model, TIP4P/2005f, is developed. The idea was to add intramolecular
degrees of freedom to the successful rigid model TIP4P/2005 in order to try to improve the …

Hydrogen bond structure of liquid water confined in nanotubes

MC Gordillo, J Martı - Chemical Physics Letters, 2000 - Elsevier
The effects of confinement in nanotubes on the hydrogen bond structure of liquid water are
studied by molecular dynamics simulation. Water has been described by means of a flexible …

A computer simulation study of the liquid–vapor coexistence curve of water

Y Guissani, B Guillot - The Journal of chemical physics, 1993 - pubs.aip.org
The liquid–vapor coexistence curve of a model water (the extended simple point charge
model, SPCE) is evaluated by molecular dynamics simulation in the (N, V, E) ensemble. It is …