Master recyclers: features and functions of bacteria associated with phytoplankton blooms

A Buchan, GR LeCleir, CA Gulvik… - Nature Reviews …, 2014 - nature.com
Marine phytoplankton blooms are annual spring events that sustain active and diverse
bloom-associated bacterial populations. Blooms vary considerably in terms of eukaryotic …

Environmental and Gut Bacteroidetes: The Food Connection

F Thomas, JH Hehemann, E Rebuffet… - Frontiers in …, 2011 - frontiersin.org
Members of the diverse bacterial phylum Bacteroidetes have colonized virtually all types of
habitats on Earth. They are among the major members of the microbiota of animals …

The avian gut microbiota: community, physiology and function in wild birds

K Grond, BK Sandercock, A Jumpponen… - Journal of Avian …, 2018 - Wiley Online Library
Gastrointestinal microbiota play a vital role in maintaining organismal health, through
facilitating nutrient uptake, detoxification and interactions with the immune system. The …

Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes

PH Janssen - Applied and environmental microbiology, 2006 - Am Soc Microbiol
In 1909, H. Joel Conn (25) expressed the hope that methods would soon be at hand by
which the significance of the different bacteria present in any soil could be determined …

The ecology of Cytophaga–Flavobacteria in aquatic environments

DL Kirchman - FEMS microbiology ecology, 2002 - academic.oup.com
Culture-dependent and-independent studies have found that prokaryotic assemblages are
quite diverse in aquatic habitats and contain representatives of virtually all of the roughly 40 …

Biodiversity of vibrios

FL Thompson, T Iida, J Swings - Microbiology and molecular …, 2004 - Am Soc Microbiol
Vibrios are ubiquitous and abundant in the aquatic environment. A high abundance of
vibrios is also detected in tissues and/or organs of various marine algae and animals, eg …

Microbial communities in acid mine drainage

BJ Baker, JF Banfield - FEMS microbiology ecology, 2003 - academic.oup.com
The dissolution of sulfide minerals such as pyrite (FeS2), arsenopyrite (FeAsS), chalcopyrite
(CuFeS2), sphalerite (ZnS), and marcasite (FeS2) yields hot, sulfuric acid-rich solutions that …

SAR11 clade dominates ocean surface bacterioplankton communities

RM Morris, MS Rappé, SA Connon, KL Vergin… - Nature, 2002 - nature.com
The most abundant class of bacterial ribosomal RNA genes detected in seawater DNA by
gene cloning belongs to SAR11—an α-proteobacterial clade. Other than indications of their …

Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria

A Pernthaler, J Pernthaler, R Amann - Applied and environmental …, 2002 - Am Soc Microbiol
Fluorescence in situ hybridization (FISH) with horseradish peroxidase (HRP)-labeled
oligonucleotide probes and tyramide signal amplification, also known as catalyzed reporter …

Predation on prokaryotes in the water column and its ecological implications

J Pernthaler - Nature Reviews Microbiology, 2005 - nature.com
The oxic realms of freshwater and marine environments are zones of high prokaryotic
mortality. Lysis by viruses and predation by ciliated and flagellated protists result in the …