Evaluation of 16S rRNA primer sets for characterisation of microbiota in paediatric patients with autism spectrum disorder

L Palkova, A Tomova, G Repiska, K Babinska… - Scientific reports, 2021 - nature.com
Abstract intestinal microbiota is becoming a significant marker that reflects differences
between health and disease status also in terms of gut-brain axis communication. Studies …

Preservation of conjugated primary bile acids by oxygenation of the small intestinal microbiota in vitro

J Firrman, ES Friedman, A Hecht, WC Strange… - Mbio, 2024 - Am Soc Microbiol
Bile acids play a critical role in the emulsification of dietary lipids, a critical step in the
primary function of the small intestine, which is the digestion and absorption of food. Primary …

High-resolution vertical biogeochemical profiles in the hyporheic zone reveal insights into microbial methane cycling

T Michaelis, A Wunderlich, ÖK Coskun, W Orsi… - …, 2022 - bg.copernicus.org
Facing the challenges of climate change, policy making relies on sound greenhouse gas
(GHG) budgets. Rivers and streams emit large quantities of the potent GHG methane (CH 4) …

Biogeochemical evidence of anaerobic methane oxidation and anaerobic ammonium oxidation in a stratified lake using stable isotopes

F Einsiedl, A Wunderlich, M Sebilo, ÖK Coskun… - …, 2020 - bg.copernicus.org
Nitrate pollution of freshwaters and methane emissions into the atmosphere are crucial
factors in deteriorating the quality of drinking water and in contributing to global climate …

Atribacteria reproducing over millions of years in the Atlantic abyssal subseafloor

A Vuillemin, S Vargas, ÖK Coskun, R Pockalny… - MBio, 2020 - Am Soc Microbiol
How microbial metabolism is translated into cellular reproduction under energy-limited
settings below the seafloor over long timescales is poorly understood. Here, we show that …

[HTML][HTML] Genetic diversity and spatiotemporal dynamics of DENV-1 and DENV-2 infections during the 2012–2013 outbreak in Mexico

ED Rodríguez-Aguilar, J Martínez-Barnetche… - Virology, 2022 - Elsevier
Dengue fever is caused by four related dengue virus serotypes, DENV-1 to DENV-4, where
each serotype comprises distinct genotypes and lineages. The last major outbreak in Mexico …

Organic farming promotes the abundance of fungi keystone taxa in bacteria-fungi interkingdom networks

FP Matteoli, AMM Silva, VLVP de Araújo… - World Journal of …, 2024 - Springer
Soil bacteria-fungi interactions are essential in the biogeochemical cycles of several
nutrients, making these microbes major players in agroecosystems. While the impact of the …

Microbial activities and selection from surface ocean to subseafloor on the Namibian continental shelf

A Vuillemin, ÖK Coskun, WD Orsi - Applied and environmental …, 2022 - Am Soc Microbiol
Oxygen minimum zones (OMZs) are hot spots for redox-sensitive nitrogen transformations
fueled by sinking organic matter. In comparison, the regulating role of sulfur-cycling …

Genome evolution in bacteria isolated from million-year-old subseafloor sediment

WD Orsi, T Magritsch, S Vargas, ÖK Coskun… - Mbio, 2021 - Am Soc Microbiol
Beneath the seafloor, microbial life subsists in isolation from the surface world under
persistent energy limitation. The nature and extent of genomic evolution in subseafloor …

[PDF][PDF] Diversity analysis of the endosymbiotic bacterial community in field-collected Haemaphysalis ticks on the tropical Hainan Island, China.

Y Lu, S Yang, Q Zhao, C Yuan, Q Xia - Folia Parasitologica, 2023 - folia.paru.cas.cz
Ticks are important vectors of various pathogens that cause infectious diseases in humans.
Endosymbiotic bacteria have been explored as targets for tick and tick-borne disease …