Soil viral diversity, ecology and climate change

JK Jansson, R Wu - Nature Reviews Microbiology, 2023 - nature.com
Soil viruses are highly abundant and have important roles in the regulation of host dynamics
and soil ecology. Climate change is resulting in unprecedented changes to soil ecosystems …

Diversity in the soil virosphere: to infinity and beyond?

S Roux, JB Emerson - Trends in Microbiology, 2022 - cell.com
Viruses are key members of Earth's microbiomes, shaping microbial community composition
and metabolism. Here, we describe recent advances in'soil viromics', that is, virus-focused …

Extreme summers impact cropland and grassland soil microbiomes

Q Bei, T Reitz, B Schnabel, N Eisenhauer… - The ISME …, 2023 - academic.oup.com
The increasing frequency of extreme weather events highlights the need to understand how
soil microbiomes respond to such disturbances. Here, metagenomics was used to …

Viral but not bacterial community successional patterns reflect extreme turnover shortly after rewetting dry soils

C Santos-Medellín, SJ Blazewicz… - Nature Ecology & …, 2023 - nature.com
As central members of soil trophic networks, viruses have the potential to drive substantial
microbial mortality and nutrient turnover. Pinpointing viral contributions to terrestrial …

Spatial turnover of soil viral populations and genotypes overlain by cohesive responses to moisture in grasslands

C Santos-Medellín, K Estera-Molina… - Proceedings of the …, 2022 - National Acad Sciences
Viruses shape microbial communities, food web dynamics, and carbon and nutrient cycling
in diverse ecosystems. However, little is known about the patterns and drivers of viral …

Hi-C metagenome sequencing reveals soil phage–host interactions

R Wu, MR Davison, WC Nelson, ML Smith… - Nature …, 2023 - nature.com
Bacteriophages are abundant in soils. However, the majority are uncharacterized, and their
hosts are unknown. Here, we apply high-throughput chromosome conformation capture (Hi …

Structural characterization of a soil viral auxiliary metabolic gene product–a functional chitosanase

R Wu, CA Smith, GW Buchko, IK Blaby… - Nature …, 2022 - nature.com
Metagenomics is unearthing the previously hidden world of soil viruses. Many soil viral
sequences in metagenomes contain putative auxiliary metabolic genes (AMGs) that are not …

Integrating viruses into soil food web biogeochemistry

C Carreira, C Lønborg, B Acharya, L Aryal… - Nature …, 2024 - nature.com
The soil microbiome is recognized as an essential component of healthy soils. Viruses are
also diverse and abundant in soils, but their roles in soil systems remain unclear. Here we …

Underexplored viral auxiliary metabolic genes in soil: diversity and eco‐evolutionary significance

M Sun, S Yuan, R Xia, M Ye… - Environmental …, 2023 - Wiley Online Library
Bacterial viruses are the most abundant biological entities in soil ecosystems. Owing to the
advent of metagenomics and viromics approaches, an ever‐increasing diversity of virus …

Effects of experimentally elevated virus abundance on soil carbon cycling across varying ecosystem types

ED Osburn, SG Baer, SE Evans, SG McBride… - Soil Biology and …, 2024 - Elsevier
Viruses are abundant and diverse members of soil communities, but their influences on soil
biogeochemical cycling are poorly understood. To assess the potential for viruses to …