Transcription factors: from enhancer binding to developmental control

F Spitz, EEM Furlong - Nature reviews genetics, 2012 - nature.com
Developmental progression is driven by specific spatiotemporal domains of gene
expression, which give rise to stereotypically patterned embryos even in the presence of …

Network biology: understanding the cell's functional organization

AL Barabasi, ZN Oltvai - Nature reviews genetics, 2004 - nature.com
A key aim of postgenomic biomedical research is to systematically catalogue all molecules
and their interactions within a living cell. There is a clear need to understand how these …

Transcriptional regulatory code of a eukaryotic genome

CT Harbison, DB Gordon, TI Lee, NJ Rinaldi… - Nature, 2004 - nature.com
DNA-binding transcriptional regulators interpret the genome's regulatory code by binding to
specific sequences to induce or repress gene expression. Comparative genomics has …

AREB1 Is a Transcription Activator of Novel ABRE-Dependent ABA Signaling That Enhances Drought Stress Tolerance in Arabidopsis

Y Fujita, M Fujita, R Satoh, K Maruyama… - The Plant …, 2005 - academic.oup.com
Abstract ABSCISIC ACID–RESPONSIVE ELEMENT BINDING PROTEIN1 (AREB1)(ie,
ABF2) is a basic domain/leucine zipper transcription factor that binds to the abscisic acid …

Reconstruction of biochemical networks in microorganisms

AM Feist, MJ Herrgård, I Thiele, JL Reed… - Nature Reviews …, 2009 - nature.com
Abstract Systems analysis of metabolic and growth functions in microbial organisms is
rapidly developing and maturing. Such studies are enabled by reconstruction, at the …

Cell Wall Assembly in Saccharomyces cerevisiae

G Lesage, H Bussey - Microbiology and molecular biology reviews, 2006 - Am Soc Microbiol
An extracellular matrix composed of a layered meshwork of β-glucans, chitin, and
mannoproteins encapsulates cells of the yeast Saccharomyces cerevisiae. This organelle …

Sequencing and comparison of yeast species to identify genes and regulatory elements

M Kellis, N Patterson, M Endrizzi, B Birren, ES Lander - Nature, 2003 - nature.com
Identifying the functional elements encoded in a genome is one of the principal challenges
in modern biology. Comparative genomics should offer a powerful, general approach. Here …

T-bet and GATA3 orchestrate Th1 and Th2 differentiation through lineage-specific targeting of distal regulatory elements

A Kanhere, A Hertweck, U Bhatia, MR Gökmen… - Nature …, 2012 - nature.com
T-bet and GATA3 regulate the CD4+ T cell Th1/Th2 cell fate decision but little is known
about the interplay between these factors outside of the murine Ifng and Il4/Il5/Il13 loci. Here …

[HTML][HTML] Function and regulation in MAPK signaling pathways: lessons learned from the yeast Saccharomyces cerevisiae

RE Chen, J Thorner - Biochimica et Biophysica Acta (BBA)-Molecular Cell …, 2007 - Elsevier
Signaling pathways that activate different mitogen-activated protein kinases (MAPKs) elicit
many of the responses that are evoked in cells by changes in certain environmental …

Flocculation, adhesion and biofilm formation in yeasts

KJ Verstrepen, FM Klis - Molecular microbiology, 2006 - Wiley Online Library
Yeast cells possess a remarkable capacity to adhere to abiotic surfaces, cells and tissues.
These adhesion properties are of medical and industrial relevance. Pathogenic yeasts such …