[HTML][HTML] In Silico Toxicology Data Resources to Support Read-Across and (Q)SAR

G Pawar, JC Madden, D Ebbrell, JW Firman… - Frontiers in …, 2019 - frontiersin.org
A plethora of databases exist online that can assist in in silico chemical or drug safety
assessment. However, a systematic review and grouping of databases, based on purpose …

Computational modeling of β-secretase 1 (BACE-1) inhibitors using ligand based approaches

G Subramanian, B Ramsundar, V Pande… - Journal of chemical …, 2016 - ACS Publications
The binding affinities (IC50) reported for diverse structural and chemical classes of human β-
secretase 1 (BACE-1) inhibitors in literature were modeled using multiple in silico ligand …

Scaffold-hopping as a strategy to address metabolic liabilities of aromatic compounds

PR Lazzara, TW Moore - RSC Medicinal Chemistry, 2020 - pubs.rsc.org
Understanding and minimizing oxidative metabolism of aromatic compounds is a key hurdle
in lead optimization. Metabolic processes not only clear compounds from the body, but they …

Understanding the metabolism of proteolysis targeting chimeras (PROTACs): the next step toward pharmaceutical applications

L Goracci, J Desantis, A Valeri… - Journal of Medicinal …, 2020 - ACS Publications
Hetero-bifunctional PROteolysis TArgeting Chimeras (PROTACs) represent a new emerging
class of small molecules designed to induce polyubiquitylation and proteasomal-dependent …

[HTML][HTML] CYPlebrity: Machine learning models for the prediction of inhibitors of cytochrome P450 enzymes

W Plonka, C Stork, M Šícho, J Kirchmair - Bioorganic & medicinal chemistry, 2021 - Elsevier
The vast majority of approved drugs are metabolized by the five major cytochrome P450
(CYP) isozymes, 1A2, 2C9, 2C19, 2D6 and 3A4. Inhibition of CYP isozymes can cause drug …

In silico approaches in carcinogenicity hazard assessment: current status and future needs

RR Tice, A Bassan, A Amberg, LT Anger… - Computational …, 2021 - Elsevier
Historically, identifying carcinogens has relied primarily on tumor studies in rodents, which
require enormous resources in both money and time. In silico models have been developed …

[图书][B] Biodiversity and biomedicine: Our future

M Ozturk, D Egamberdieva, M Pešić - 2020 - books.google.com
Biodiversity and Biomedicine: Our Future provides a new outlook on Earth's animal, plant,
and fungi species as vital sources for human health treatments. While there are over 10 …

Advancing the science of a read-across framework for evaluation of data-poor chemicals incorporating systematic and new approach methods

LE Lizarraga, GW Suter, JC Lambert… - Regulatory Toxicology …, 2023 - Elsevier
The assessment of human health hazards posed by chemicals traditionally relies on toxicity
studies in experimental animals. However, most chemicals currently in commerce do not …

Computational chemical biology and drug design: Facilitating protein structure, function, and modulation studies

M Zheng, J Zhao, C Cui, Z Fu, X Li, X Liu… - Medicinal research …, 2018 - Wiley Online Library
Over the past quarter of a century, there has been rapid development in structural biology,
which now can provide solid evidence for understanding the functions of proteins …

[HTML][HTML] Computer-aided estimation of biological activity profiles of drug-like compounds taking into account their metabolism in human body

DA Filimonov, AV Rudik, AV Dmitriev… - International Journal of …, 2020 - mdpi.com
Most pharmaceutical substances interact with several or even many molecular targets in the
organism, determining the complex profiles of their biological activity. Moreover, due to …