Cryo-electron microscopy methodology: current aspects and future directions
Cryo-electron microscopy (cryo-EM) has emerged as a powerful structure determination
technique. Its most prolific branch is single particle analysis (SPA), a method being used in a …
technique. Its most prolific branch is single particle analysis (SPA), a method being used in a …
Protein cage assembly across multiple length scales
Within the materials science community, proteins with cage-like architectures are being
developed as versatile nanoscale platforms for use in protein nanotechnology. Much effort …
developed as versatile nanoscale platforms for use in protein nanotechnology. Much effort …
New tools for automated high-resolution cryo-EM structure determination in RELION-3
Here, we describe the third major release of RELION. CPU-based vector acceleration has
been added in addition to GPU support, which provides flexibility in use of resources and …
been added in addition to GPU support, which provides flexibility in use of resources and …
[PDF][PDF] Real-space refinement in PHENIX for cryo-EM and crystallography
This article describes the implementation of real-space refinement in the phenix.
real_space_refine program from the PHENIX suite. The use of a simplified refinement target …
real_space_refine program from the PHENIX suite. The use of a simplified refinement target …
Cryo-EM structures of human m6A writer complexes
Abstract N 6-methyladenosine (m6A) is the most abundant ribonucleotide modification
among eukaryotic messenger RNAs. The m6A “writer” consists of the catalytic subunit m6A …
among eukaryotic messenger RNAs. The m6A “writer” consists of the catalytic subunit m6A …
[PDF][PDF] New tools for the analysis and validation of cryo-EM maps and atomic models
PV Afonine, BP Klaholz, NW Moriarty… - … Section D: Structural …, 2018 - journals.iucr.org
Recent advances in the field of electron cryomicroscopy (cryo-EM) have resulted in a rapidly
increasing number of atomic models of biomacromolecules that have been solved using this …
increasing number of atomic models of biomacromolecules that have been solved using this …
Measurement of atom resolvability in cryo-EM maps with Q-scores
Cryogenic electron microscopy (cryo-EM) maps are now at the point where resolvability of
individual atoms can be achieved. However, resolvability is not necessarily uniform …
individual atoms can be achieved. However, resolvability is not necessarily uniform …
Cryo-EM structures of complex I from mouse heart mitochondria in two biochemically defined states
Complex I (NADH: ubiquinone oxidoreductase) uses the reducing potential of NADH to drive
protons across the energy-transducing inner membrane and power oxidative …
protons across the energy-transducing inner membrane and power oxidative …
Cryo-EM model validation recommendations based on outcomes of the 2019 EMDataResource challenge
This paper describes outcomes of the 2019 Cryo-EM Model Challenge. The goals were to
(1) assess the quality of models that can be produced from cryogenic electron microscopy …
(1) assess the quality of models that can be produced from cryogenic electron microscopy …
Analysis of global and site-specific radiation damage in cryo-EM
Micro-crystal electron diffraction (MicroED) combines the efficiency of electron scattering
with diffraction to allow structure determination from nano-sized crystalline samples in …
with diffraction to allow structure determination from nano-sized crystalline samples in …