High-throughput genomic data in systematics and phylogenetics
High-throughput genomic sequencing is rapidly changing the field of phylogenetics by
decreasing the cost and increasing the quantity and rate of data collection by several orders …
decreasing the cost and increasing the quantity and rate of data collection by several orders …
[HTML][HTML] Metaorganisms in extreme environments: do microbes play a role in organismal adaptation?
From protists to humans, all animals and plants are inhabited by microbial organisms. There
is an increasing appreciation that these resident microbes influence the fitness of their plant …
is an increasing appreciation that these resident microbes influence the fitness of their plant …
[HTML][HTML] Genotyping-by-sequencing in ecological and conservation genomics
The fields of ecological and conservation genetics have developed greatly in recent
decades through the use of molecular markers to investigate organisms in their natural …
decades through the use of molecular markers to investigate organisms in their natural …
RAD genotyping reveals fine‐scale genetic structuring and provides powerful population assignment in a widely distributed marine species, the a Merican Lobster (H …
L Benestan, T Gosselin, C Perrier… - Molecular …, 2015 - Wiley Online Library
Deciphering genetic structure and inferring connectivity in marine species have been
challenging due to weak genetic differentiation and limited resolution offered by traditional …
challenging due to weak genetic differentiation and limited resolution offered by traditional …
The utility of single nucleotide polymorphism (SNP) data in phylogenetics
Resolving the genealogy of life—the phylogenetic relationships that describe the
evolutionary history of species—remains one of the great challenges of systematic biology …
evolutionary history of species—remains one of the great challenges of systematic biology …
ezRAD: a simplified method for genomic genotyping in non-model organisms
Here, we introduce ezRAD, a novel strategy for restriction site–associated DNA (RAD) that
requires little technical expertise or investment in laboratory equipment, and demonstrate its …
requires little technical expertise or investment in laboratory equipment, and demonstrate its …
Use of RAD sequencing for delimiting species
RAD-tag sequencing is a promising method for conducting genome-wide evolutionary
studies. However, to date, only a handful of studies empirically tested its applicability above …
studies. However, to date, only a handful of studies empirically tested its applicability above …
Micro and macroevolution of sea anemone venom phenotype
Venom is a complex trait with substantial inter-and intraspecific variability resulting from
strong selective pressures acting on the expression of many toxic proteins. However …
strong selective pressures acting on the expression of many toxic proteins. However …
Using nuclear gene data for plant phylogenetics: Progress and prospects II. Next‐gen approaches
Single and low copy nuclear genes offer a larger number of, and more rapidly evolving,
characters than the chloroplast and nuclear ribosomal gene sequences that have dominated …
characters than the chloroplast and nuclear ribosomal gene sequences that have dominated …
RAD sequencing enables unprecedented phylogenetic resolution and objective species delimitation in recalcitrant divergent taxa
Species delimitations is problematic in many cases due to the difficulty of evaluating
predictions from species hypotheses. In many cases delimitations rely on subjective …
predictions from species hypotheses. In many cases delimitations rely on subjective …