Building and decoding ubiquitin chains for mitophagy

JW Harper, A Ordureau, JM Heo - Nature reviews Molecular cell biology, 2018 - nature.com
Mitochondria produce energy in the form of ATP via oxidative phosphorylation. As defects in
oxidative phosphorylation can generate harmful reactive oxygen species, it is important that …

Decoding the messaging of the ubiquitin system using chemical and protein probes

LT Henneberg, BA Schulman - Cell chemical biology, 2021 - cell.com
Post-translational modification of proteins by ubiquitin is required for nearly all aspects of
eukaryotic cell function. The numerous targets of ubiquitylation, and variety of ubiquitin …

Mechanism of parkin activation by PINK1

C Gladkova, SL Maslen, JM Skehel, D Komander - Nature, 2018 - nature.com
Mutations in the E3 ubiquitin ligase parkin (PARK2, also known as PRKN) and the protein
kinase PINK1 (also known as PARK6) are linked to autosomal-recessive juvenile …

Miro proteins prime mitochondria for Parkin translocation and mitophagy

D Safiulina, M Kuum, V Choubey… - The EMBO …, 2019 - embopress.org
The Parkinson's disease‐associated protein kinase PINK 1 and ubiquitin ligase Parkin
coordinate the ubiquitination of mitochondrial proteins, which marks mitochondria for …

Capturing the catalytic intermediates of parkin ubiquitination

EM Connelly, AC Rintala-Dempsey… - Proceedings of the …, 2024 - pnas.org
Parkin is an E3 ubiquitin ligase implicated in early-onset forms of Parkinson's disease. It
catalyzes a transthiolation reaction by accepting ubiquitin (Ub) from an E2 conjugating …

Protein engineering in the ubiquitin system: tools for discovery and beyond

B Zhao, YC Tsai, B Jin, B Wang, Y Wang, H Zhou… - Pharmacological …, 2020 - Elsevier
Ubiquitin (UB) transfer cascades consisting of E1, E2, and E3 enzymes constitute a complex
network that regulates a myriad of biologic processes by modifying protein substrates …

Parkin and mitochondrial signalling

EM Connelly, KS Frankel, GS Shaw - Cellular signalling, 2023 - Elsevier
Aging, toxic chemicals and changes to the cellular environment are sources of oxidative
damage to mitochondria which contribute to neurodegenerative conditions including …

[HTML][HTML] Exploration of aberrant E3 ligases implicated in Alzheimer's disease and development of chemical tools to modulate their function

FM Potjewyd, AD Axtman - Frontiers in Cellular Neuroscience, 2021 - frontiersin.org
The Ubiquitin Proteasome System (UPS) is responsible for the degradation of misfolded or
aggregated proteins via a multistep ATP-dependent proteolytic mechanism. This process …

Chemical synthesis of atomically tailored SUMO E2 conjugating enzymes for the formation of covalently linked SUMO–E2–E3 ligase ternary complexes

Y Zhang, T Hirota, K Kuwata, S Oishi… - Journal of the …, 2019 - ACS Publications
E2 conjugating enzymes are the key catalytic actors in the transfer of ubiquitin, SUMO, and
other ubiquitin-like modifiers to their substrate proteins. Their high rates of transfer and …

Miro proteins connect mitochondrial function and intercellular transport

Z Nahacka, R Zobalova, M Dubisova… - Critical Reviews in …, 2021 - Taylor & Francis
Mitochondria are organelles present in most eukaryotic cells, where they play major and
multifaceted roles. The classical notion of the main mitochondrial function as the …