Design of experiments as a tool for optimization in recombinant protein biotechnology: from constructs to crystals
C Papaneophytou - Molecular Biotechnology, 2019 - Springer
In this review, the basic concepts and applications of design of experiments (DoE) in
recombinant protein biotechnology will be discussed. The production of recombinant …
recombinant protein biotechnology will be discussed. The production of recombinant …
What's happened over the last five years with high-throughput protein crystallization screening?
Y Lin - Expert Opinion on Drug Discovery, 2018 - Taylor & Francis
Structure-based drug design (SBDD) heavily relies on the production of high-resolution (<
2Å) three-dimensional (3D) structures of the drug target in the presence or absence of the …
2Å) three-dimensional (3D) structures of the drug target in the presence or absence of the …
Ionic liquids as protein crystallization additives
CL Tarver, Q Yuan, ML Pusey - Crystals, 2021 - mdpi.com
Among its attributes, the mythical philosopher's stone is supposedly capable of turning base
metals to gold or silver. In an analogous fashion, we are finding that protein crystallization …
metals to gold or silver. In an analogous fashion, we are finding that protein crystallization …
Feature analysis for classification of trace fluorescent labeled protein crystallization images
Background Large number of features are extracted from protein crystallization trial images
to improve the accuracy of classifiers for predicting the presence of crystals or phases of the …
to improve the accuracy of classifiers for predicting the presence of crystals or phases of the …
Schema matching and data integration with consistent naming on protein crystallization screens
M Shrestha, TX Tran, B Bhattarai… - … ACM transactions on …, 2019 - ieeexplore.ieee.org
The data representation as well as naming conventions used in commercial screen files by
different companies make the automated analysis of crystallization experiments difficult and …
different companies make the automated analysis of crystallization experiments difficult and …
Multimedia retrieval that works
R Aygun, W Benesova - 2018 IEEE conference on multimedia …, 2018 - ieeexplore.ieee.org
Multimedia information retrieval has been a challenging problem due to the diversity and
size of multimedia data along with difficulty of expressing desired queries. This paper …
size of multimedia data along with difficulty of expressing desired queries. This paper …
An Analysis on Commercial Screening Kits and Chemical Components in Biomacromolecular Crystallization Screening
W Qin, SX Xie, J Zhang, D Zhao, CX He… - Crystal Research …, 2019 - Wiley Online Library
Obtaining diffraction‐quality crystals is still a bottleneck for biomacromolecular structure
determination using X‐ray diffraction. In practice, the bottleneck mainly comprises two …
determination using X‐ray diffraction. In practice, the bottleneck mainly comprises two …
Optimizing genetic algorithm for protein crystallization screening using an exploratory fitness function
B Bhattarai, M Shrestha, RS Aygun… - … on Bioinformatics and …, 2017 - ieeexplore.ieee.org
Protein crystallization is the process of formation of protein crystals. Many combinations of
chemicals need to be tried to obtain a crystal for some difficult proteins. This paper discusses …
chemicals need to be tried to obtain a crystal for some difficult proteins. This paper discusses …
GenScreen: A genetic algorithm for protein crystallization screening
S Acharya - 2016 - louis.uah.edu
Protein crystallization screening focuses on determining the factors crucial for successful
protein crystallization. Protein crystallization may require large number of parameters to be …
protein crystallization. Protein crystallization may require large number of parameters to be …
Visual-x2: interactive visualization and analysis tool for protein crystallization
In high-throughput systems, the crystallization experiments require the inspection and
analysis of a large number of trial images. The visualization and analysis tools are needed …
analysis of a large number of trial images. The visualization and analysis tools are needed …