The Genomic Diversification of the Whole Acinetobacter Genus: Origins, Mechanisms, and Consequences

M Touchon, J Cury, EJ Yoon, L Krizova… - Genome biology and …, 2014 - academic.oup.com
Bacterial genomics has greatly expanded our understanding of microdiversification patterns
within a species, but analyses at higher taxonomical levels are necessary to understand and …

Characterization of Melioribacter roseus gen. nov., sp. nov., a novel facultatively anaerobic thermophilic cellulolytic bacterium from the class Ignavibacteria, and a proposal of a novel …

OA Podosokorskaya, VV Kadnikov… - Environmental …, 2013 - Wiley Online Library
A novel moderately thermophilic, facultatively anaerobic chemoorganotrophic bacterium
strain P3M‐2 T was isolated from a microbial mat developing on the wooden surface of a …

Diversification rates and species richness across the Tree of Life

JP Scholl, JJ Wiens - Proceedings of the Royal Society B …, 2016 - royalsocietypublishing.org
Species richness varies dramatically among clades across the Tree of Life, by over a million-
fold in some cases (eg placozoans versus arthropods). Two major explanations for …

Serpentinite and the dawn of life

NH Sleep, DK Bird, EC Pope - … Transactions of the …, 2011 - royalsocietypublishing.org
Submarine hydrothermal vents above serpentinite produce chemical potential gradients of
aqueous and ionic hydrogen, thus providing a very attractive venue for the origin of life. This …

The timetree of prokaryotes: new insights into their evolution and speciation

J Marin, FU Battistuzzi, AC Brown… - Molecular biology and …, 2016 - academic.oup.com
The increasing size of timetrees in recent years has led to a focus on diversification analyses
to better understand patterns of macroevolution. Thus far, nearly all studies have been …

Evolution of the Insect Yellow Gene Family

LC Ferguson, J Green, A Surridge… - Molecular biology and …, 2011 - academic.oup.com
The yellow gene family is intriguing for a number of reasons. To date, yellow-like genes
have only been identified in insect species and a number of bacteria. The function of the …

Geological and geochemical constraints on the origin and evolution of life

NH Sleep - Astrobiology, 2018 - liebertpub.com
The traditional tree of life from molecular biology with last universal common ancestor
(LUCA) branching into bacteria and archaea (though fuzzy) is likely formally valid enough to …

Bacteria can maintain rRNA operons solely on plasmids for hundreds of millions of years

M Anda, S Yamanouchi, S Cosentino… - Nature …, 2023 - nature.com
It is generally assumed that all bacteria must have at least one rRNA operon (rrn operon) on
the chromosome, but some strains of the genera Aureimonas and Oecophyllibacter carry …

A Bayesian method for analyzing lateral gene transfer

J Sjöstrand, A Tofigh, V Daubin, L Arvestad… - Systematic …, 2014 - academic.oup.com
Lateral gene transfer (LGT)—which transfers DNA between two non-vertically related
individuals belonging to the same or different species—is recognized as a major force in …

Evolutionary diversification of protein–protein interactions by interface add-ons

MG Plach, F Semmelmann, F Busch… - Proceedings of the …, 2017 - National Acad Sciences
Cells contain a multitude of protein complexes whose subunits interact with high specificity.
However, the number of different protein folds and interface geometries found in nature is …