Hydrogen exchange mass spectrometry for the analysis of protein dynamics

TE Wales, JR Engen - Mass spectrometry reviews, 2006 - Wiley Online Library
Hydrogen exchange coupled to mass spectrometry (MS) has become a valuable analytical
tool for the study of protein dynamics. By combining information about protein dynamics with …

Differential regulation of MAP kinase signalling by dual-specificity protein phosphatases

DM Owens, SM Keyse - Oncogene, 2007 - nature.com
The regulated dephosphorylation of mitogen-activated protein kinases (MAPKs) plays a key
role in determining the magnitude and duration of kinase activation and hence the …

Advances in hydrogen/deuterium exchange mass spectrometry and the pursuit of challenging biological systems

EI James, TA Murphree, C Vorauer, JR Engen… - Chemical …, 2021 - ACS Publications
Solution-phase hydrogen/deuterium exchange (HDX) coupled to mass spectrometry (MS) is
a widespread tool for structural analysis across academia and the biopharmaceutical …

Sub‐angstrom modeling of complexes between flexible peptides and globular proteins

B Raveh, N London… - … : Structure, Function, and …, 2010 - Wiley Online Library
A wide range of regulatory processes in the cell are mediated by flexible peptides that fold
upon binding to globular proteins. Computational efforts to model these interactions are …

Post-translational modifications differentially affect IgG1 conformation and receptor binding

D Houde, Y Peng, SA Berkowitz, JR Engen - Molecular & Cellular …, 2010 - ASBMB
Post-translational modifications (PTMs) can have profound effects on protein structure and
protein dynamics and thereby can influence protein function. To understand and connect …

Rosetta FlexPepDock ab-initio: Simultaneous Folding, Docking and Refinement of Peptides onto Their Receptors

B Raveh, N London, L Zimmerman… - PloS one, 2011 - journals.plos.org
Flexible peptides that fold upon binding to another protein molecule mediate a large number
of regulatory interactions in the living cell and may provide highly specific recognition …

Dynamics of cAMP-dependent protein kinase

DA Johnson, P Akamine, E Radzio-Andzelm… - Chemical …, 2001 - ACS Publications
Protein phosphorylation, first elucidated as a regulatory mechanism in 1955, 1 is very likely
the most important mechanism for regulation in mammalian cells. While allosteric regulation …

Protein analysis by hydrogen exchange mass spectrometry

AN Hoofnagle, KA Resing… - Annual review of …, 2003 - annualreviews.org
▪ Abstract Mass spectrometry has provided a powerful method for monitoring hydrogen
exchange of protein backbone amides with deuterium from solvent. In comparison to …

[图书][B] Cell biology: a laboratory handbook

JE Celis - 2006 - books.google.com
This four-volume laboratory manual contains comprehensive state-of-the-art protocols
essential for research in the life sciences. Techniques are presented in a friendly step-by …

Probing protein ligand interactions by automated hydrogen/deuterium exchange mass spectrometry

MJ Chalmers, SA Busby, BD Pascal, Y He… - Analytical …, 2006 - ACS Publications
Amide hydrogen/deuterium exchange is a powerful biophysical technique for probing
changes in protein dynamics induced by ligand interaction. The inherent low throughput of …