The intertwining of Zn-finger motifs and abiotic stress tolerance in plants: Current status and future prospects

D Moulick, KL Bhutia, S Sarkar, A Roy… - Frontiers in Plant …, 2023 - frontiersin.org
Environmental stresses such as drought, high salinity, and low temperature can adversely
modulate the field crop's ability by altering the morphological, physiological, and …

Evolution of TOR–SnRK dynamics in green plants and its integration with phytohormone signaling networks

M Jamsheer K, S Jindal, A Laxmi - Journal of Experimental …, 2019 - academic.oup.com
The target of rapamycin (TOR)–sucrose non-fermenting 1 (SNF1)-related protein kinase 1
(SnRK1) signaling is an ancient regulatory mechanism that originated in eukaryotes to …

A positive feedback regulation of SnRK1 signaling by autophagy in plants

C Yang, X Li, L Yang, S Chen, J Liao, K Li, J Zhou… - Molecular Plant, 2023 - cell.com
SnRK1, an evolutionarily conserved heterotrimeric kinase complex that acts as a key
metabolic sensor in maintaining energy homeostasis in plants, is an important upstream …

A negative feedback loop of TOR signaling balances growth and stress-response trade-offs in plants

S Jindal, M Sharma, P Awasthi, S Sreejath, M Sharma… - Cell Reports, 2022 - cell.com
TOR kinase is a central coordinator of nutrient-dependent growth in eukaryotes. Maintaining
optimal TOR signaling is critical for the normal development of organisms. In this study, we …

DeepDISOBind: accurate prediction of RNA-, DNA-and protein-binding intrinsically disordered residues with deep multi-task learning

F Zhang, B Zhao, W Shi, M Li… - Briefings in …, 2022 - academic.oup.com
Proteins with intrinsically disordered regions (IDRs) are common among eukaryotes. Many
IDRs interact with nucleic acids and proteins. Annotation of these interactions is supported …

SNF1-related protein kinase 1: the many-faced signaling hub regulating developmental plasticity in plants

M Jamsheer K, M Kumar… - Journal of Experimental …, 2021 - academic.oup.com
The Snf1-related protein kinase 1 (SnRK1) is the plant homolog of the heterotrimeric AMP-
activated protein kinase/sucrose non-fermenting 1 (AMPK/Snf1), which works as a major …

Genetic control of root architectural plasticity in maize

HM Schneider, SP Klein, MT Hanlon… - Journal of …, 2020 - academic.oup.com
Root phenotypes regulate soil resource acquisition; however, their genetic control and
phenotypic plasticity are poorly understood. We hypothesized that the responses of root …

[HTML][HTML] Computational prediction of MoRFs, short disorder-to-order transitioning protein binding regions

A Katuwawala, Z Peng, J Yang, L Kurgan - Computational and Structural …, 2019 - Elsevier
Molecular recognition features (MoRFs) are short protein-binding regions that undergo
disorder-to-order transitions (induced folding) upon binding protein partners. These regions …

Compartmentalization, a key mechanism controlling the multitasking role of the SnRK1 complex

E Gutierrez-Beltran, JL Crespo - Journal of Experimental Botany, 2022 - academic.oup.com
Abstract SNF1-related protein kinase 1 (SnRK1), the plant ortholog of mammalian AMP-
activated protein kinase/fungal (yeast) Sucrose Non-Fermenting 1 (AMPK/SNF1), plays a …

[HTML][HTML] The metabolic homeostaTOR: the balance of holding on or letting grow

A Artins, C Caldana - Current Opinion in Plant Biology, 2022 - Elsevier
Plants, as autotrophic organisms, capture light energy to convert carbon dioxide into ATP,
NADPH, and sugars, which are essential for the biosynthesis of building blocks, cell …