The ecology and biotechnology of sulphate-reducing bacteria

G Muyzer, AJM Stams - Nature reviews microbiology, 2008 - nature.com
Sulphate-reducing bacteria (SRB) are anaerobic microorganisms that use sulphate as a
terminal electron acceptor in, for example, the degradation of organic compounds. They are …

Microbial ecology of expanding oxygen minimum zones

JJ Wright, KM Konwar, SJ Hallam - Nature Reviews Microbiology, 2012 - nature.com
Dissolved oxygen concentration is a crucial organizing principle in marine ecosystems. As
oxygen levels decline, energy is increasingly diverted away from higher trophic levels into …

phyloFlash: rapid small-subunit rRNA profiling and targeted assembly from metagenomes

HR Gruber-Vodicka, BKB Seah, E Pruesse - Msystems, 2020 - Am Soc Microbiol
The small-subunit rRNA (SSU rRNA) gene is the key marker in molecular ecology for all
domains of life, but it is largely absent from metagenome-assembled genomes that often are …

High-resolution spatial and genomic characterization of coral-associated microbial aggregates in the coral Stylophora pistillata

N Wada, MT Hsu, K Tandon, SSY Hsiao, HJ Chen… - Science …, 2022 - science.org
Bacteria commonly form aggregates in a range of coral species [termed coral-associated
microbial aggregates (CAMAs)], although these structures remain poorly characterized …

[图书][B] Dynamic energy budget theory for metabolic organisation

SALM Kooijman - 2010 - books.google.com
" Dynamic Energy Budget (DEB) theory is a formal theory for the uptake and use of
substrates (food, nutrients and light) by organisms and their use for maintenance, growth …

A post-genomic view of the ecophysiology, catabolism and biotechnological relevance of sulphate-reducing prokaryotes

R Rabus, SS Venceslau, L Wöhlbrand… - Advances in microbial …, 2015 - Elsevier
Dissimilatory sulphate reduction is the unifying and defining trait of sulphate-reducing
prokaryotes (SRP). In their predominant habitats, sulphate-rich marine sediments, SRP have …

Sponge-associated microorganisms: evolution, ecology, and biotechnological potential

MW Taylor, R Radax, D Steger… - … and molecular biology …, 2007 - Am Soc Microbiol
Marine sponges often contain diverse and abundant microbial communities, including
bacteria, archaea, microalgae, and fungi. In some cases, these microbial associates …

Symbiotic diversity in marine animals: the art of harnessing chemosynthesis

N Dubilier, C Bergin, C Lott - Nature Reviews Microbiology, 2008 - nature.com
Chemosynthetic symbioses between bacteria and marine invertebrates were discovered 30
years ago at hydrothermal vents on the Galapagos Rift. Remarkably, it took the discovery of …

[HTML][HTML] Marine animal microbiomes: toward understanding host–microbiome interactions in a changing ocean

A Apprill - Frontiers in Marine Science, 2017 - frontiersin.org
All animals on Earth form associations with microorganisms, including protists, bacteria,
archaea, fungi, and viruses. In the ocean, animal–microbial relationships were historically …

Oxygen minimum zone benthos: adaptation and community response to hypoxia

RN Gibson, RJA Atkinson - Oceanogr. Marine Biol. Annu. Rev, 2003 - books.google.com
Abstract Mid-water oxygen minima (0.5 mll 1 dissolved O2) intercept the continental margins
along much of the eastern Pacific Ocean, off west Africa and in the Arabian Sea and Bay of …