Control of DNA replication timing in the 3D genome

C Marchal, J Sima, DM Gilbert - Nature Reviews Molecular Cell Biology, 2019 - nature.com
The 3D organization of mammalian chromatin was described more than 30 years ago by
visualizing sites of DNA synthesis at different times during the S phase of the cell cycle …

Double-strand break repair: 53BP1 comes into focus

S Panier, SJ Boulton - Nature reviews Molecular cell biology, 2014 - nature.com
DNA double-strand break (DSB) signalling and repair is crucial to preserve genomic
integrity and maintain cellular homeostasis. p53-binding protein 1 (53BP1) is an important …

DNA replication origin activation in space and time

M Fragkos, O Ganier, P Coulombe… - Nature reviews Molecular …, 2015 - nature.com
DNA replication begins with the assembly of pre-replication complexes (pre-RCs) at
thousands of DNA replication origins during the G1 phase of the cell cycle. At the G1–S …

CTCF and cohesin in genome folding and transcriptional gene regulation

M Merkenschlager, EP Nora - Annual review of genomics and …, 2016 - annualreviews.org
Genome function, replication, integrity, and propagation rely on the dynamic structural
organization of chromosomes during the cell cycle. Genome folding in interphase provides …

Shieldin–the protector of DNA ends

D Setiaputra, D Durocher - EMBO reports, 2019 - embopress.org
DNA double‐strand breaks are a threat to genome integrity and cell viability. The nucleolytic
processing of broken DNA ends plays a central role in dictating the repair processes that will …

RIF1 is essential for 53BP1-dependent nonhomologous end joining and suppression of DNA double-strand break resection

JR Chapman, P Barral, JB Vannier, V Borel, M Steger… - Molecular cell, 2013 - cell.com
The appropriate execution of DNA double-strand break (DSB) repair is critical for genome
stability and tumor avoidance. 53BP1 and BRCA1 directly influence DSB repair pathway …

The impact of replication stress on replication dynamics and DNA damage in vertebrate cells

H Técher, S Koundrioukoff, A Nicolas… - Nature Reviews …, 2017 - nature.com
The interplay between replication stress and the S phase checkpoint is a key determinant of
genome maintenance, and has a major impact on human diseases, notably, tumour …

53BP1 regulates DSB repair using Rif1 to control 5′ end resection

M Zimmermann, F Lottersberger, SB Buonomo, A Sfeir… - Science, 2013 - science.org
The choice between double-strand break (DSB) repair by either homology-directed repair
(HDR) or nonhomologous end joining (NHEJ) is tightly regulated. Defects in this regulation …

DNA replication timing

N Rhind, DM Gilbert - Cold Spring Harbor perspectives …, 2013 - cshperspectives.cshlp.org
Patterns of replication within eukaryotic genomes correlate with gene expression, chromatin
structure, and genome evolution. Recent advances in genome-scale mapping of replication …

Rif1 prevents resection of DNA breaks and promotes immunoglobulin class switching

M Di Virgilio, E Callen, A Yamane, W Zhang… - Science, 2013 - science.org
DNA double-strand breaks (DSBs) represent a threat to the genome because they can lead
to the loss of genetic information and chromosome rearrangements. The DNA repair protein …