Plant–microbiome interactions: from community assembly to plant health

P Trivedi, JE Leach, SG Tringe, T Sa… - Nature reviews …, 2020 - nature.com
Healthy plants host diverse but taxonomically structured communities of microorganisms, the
plant microbiota, that colonize every accessible plant tissue. Plant-associated microbiomes …

Entomopathogenic nematodes and their symbiotic bacteria: from genes to field uses

E Tarasco, E Fanelli, C Salvemini… - Frontiers in Insect …, 2023 - frontiersin.org
The term “microbial control” has been used to describe the use of microbial pathogens
(bacteria, viruses, or fungi) or entomopathogenic nematodes (EPNs) to control various insect …

Ecosystem type drives soil eukaryotic diversity and composition in Europe

J Köninger, C Ballabio, P Panagos… - Global change …, 2023 - Wiley Online Library
Soil eukaryotes play a crucial role in maintaining ecosystem functions and services, yet the
factors driving their diversity and distribution remain poorly understood. While many studies …

Soil microbial communities in diverse agroecosystems exposed to the herbicide glyphosate

RM Kepler, DJ Epp Schmidt, SA Yarwood… - Applied and …, 2020 - Am Soc Microbiol
Despite glyphosate's wide use for weed control in agriculture, questions remain about the
herbicide's effect on soil microbial communities. The existing scientific literature contains …

Eukaryotes in soil aggregates across conservation managements: Major roles of protists, fungi and taxa linkages in soil structuring and C stock

E Pellegrino, G Piazza, T Helgason, L Ercoli - Soil Biology and …, 2021 - Elsevier
The stabilization of soil organic carbon (SOC) promoted by conservation agriculture (CA)
depends on soil aggregation. Aggregation protects SOC and creates heterogeneous …

[PDF][PDF] Metabarcoding data allow for reliable biomass estimates in the most abundant animals on earth

J Schenk, S Geisen, N Kleinboelting… - Metabarcoding and …, 2019 - mbmg.pensoft.net
Microscopic organisms are the dominant and most diverse organisms on Earth. Nematodes,
as part of this microscopic diversity, are by far the most abundant animals and their diversity …

Using high-throughput sequencing quantitatively to investigate soil nematode community composition in a steppe-forest ecotone

XF Du, YB Li, X Han, W Ahmad, Q Li - Applied Soil Ecology, 2020 - Elsevier
The analysis of nematode community composition by high throughput sequencing (HTS)
has attracted much attention because of its advantage for throughput, high resolution and …

A DNA metabarcoding approach to characterize soil arthropod communities

AM Oliverio, H Gan, K Wickings, N Fierer - Soil Biology and Biochemistry, 2018 - Elsevier
Belowground arthropod communities are diverse and our ability to characterize them
remains logistically difficult and time consuming. Molecular metabarcoding techniques are …

Nematode mitochondrial metagenomics: A new tool for biodiversity analysis

EM Gendron, JL Sevigny, I Byiringiro… - Molecular Ecology …, 2023 - Wiley Online Library
DNA barcoding approaches have greatly increased our understanding of biodiversity on the
planet, and metabarcoding is widely used for classifying members of the phylum Nematoda …

Comparison of morphological, DNA barcoding, and metabarcoding characterizations of freshwater nematode communities

J Schenk, N Kleinbölting… - Ecology and …, 2020 - Wiley Online Library
Biomonitoring approaches and investigations of many ecological questions require
assessments of the biodiversity of a given habitat. Small organisms, ranging from …