Recent advances in machine learning methods for predicting heat shock proteins
W Chen, P Feng, T Liu, D Jin - Current Drug Metabolism, 2019 - ingentaconnect.com
Background: As molecular chaperones, Heat Shock Proteins (HSPs) not only play key roles
in protein folding and maintaining protein stabilities, but are also linked with multiple kinds of …
in protein folding and maintaining protein stabilities, but are also linked with multiple kinds of …
A short survey on protein blocks
Protein structures are classically described in terms of secondary structures. However, even
if the regular secondary structures have relevant physical meaning, their recognition based …
if the regular secondary structures have relevant physical meaning, their recognition based …
iHSP-PseRAAAC: Identifying the heat shock protein families using pseudo reduced amino acid alphabet composition
Heat shock proteins (HSPs) are a type of functionally related proteins present in all living
organisms, both prokaryotes and eukaryotes. They play essential roles in protein–protein …
organisms, both prokaryotes and eukaryotes. They play essential roles in protein–protein …
[HTML][HTML] pLoc_bal-mHum: predict subcellular localization of human proteins by PseAAC and quasi-balancing training dataset
KC Chou, X Cheng, X Xiao - Genomics, 2019 - Elsevier
A cell contains numerous protein molecules. One of the fundamental goals in molecular cell
biology is to determine their subcellular locations since this information is extremely …
biology is to determine their subcellular locations since this information is extremely …
Identification of Heat Shock Protein families and J-protein types by incorporating Dipeptide Composition into Chou's general PseAAC
Abstract Heat Shock Proteins (HSPs) are the substantial ingredients for cell growth and
viability, which are found in all living organisms. HSPs manage the process of folding and …
viability, which are found in all living organisms. HSPs manage the process of folding and …
RAACBook: a web server of reduced amino acid alphabet for sequence-dependent inference by using Chou's five-step rule
By reducing amino acid alphabet, the protein complexity can be significantly simplified,
which could improve computational efficiency, decrease information redundancy and reduce …
which could improve computational efficiency, decrease information redundancy and reduce …
RaacLogo: a new sequence logo generator by using reduced amino acid clusters
L Zheng, D Liu, W Yang, L Yang… - Briefings in …, 2021 - academic.oup.com
Sequence logos give a fast and concise display in visualizing consensus sequence. Protein
exhibits greater complexity and diversity than DNA, which usually affects the graphical …
exhibits greater complexity and diversity than DNA, which usually affects the graphical …
Predicting peroxidase subcellular location by hybridizing different descriptors of Chou'pseudo amino acid patterns
Peroxidases as universal enzymes are essential for the regulation of reactive oxygen
species levels and play major roles in both disease prevention and human pathologies …
species levels and play major roles in both disease prevention and human pathologies …
iDPF-PseRAAAC: a web-server for identifying the defensin peptide family and subfamily using pseudo reduced amino acid alphabet composition
Defensins as one of the most abundant classes of antimicrobial peptides are an essential
part of the innate immunity that has evolved in most living organisms from lower organisms …
part of the innate immunity that has evolved in most living organisms from lower organisms …
Analysis and prediction of animal toxins by various Chou's pseudo components and reduced amino acid compositions
Y Pan, S Wang, Q Zhang, Q Lu, D Su, Y Zuo… - Journal of theoretical …, 2019 - Elsevier
The animal toxin proteins are one of the disulfide rich small peptides that detected in
venomous species. They are used as pharmacological tools and therapeutic agents in …
venomous species. They are used as pharmacological tools and therapeutic agents in …