multiFLEX-LF: A computational approach to quantify the modification stoichiometries in label-free proteomics data sets

P Hiort, CN Schlaffner, JA Steen… - Journal of proteome …, 2022 - ACS Publications
In liquid-chromatography–tandem-mass-spectrometry-based proteomics, information about
the presence and stoichiometry of protein modifications is not readily available. To …

Detecting Differential Alternative Splicing in Mass Spectrometry-based Proteomics Data

C Ammar, G Csaba, A Hadziahmetovic, C Vasilopoulou… - bioRxiv, 2023 - biorxiv.org
Alternative splicing can substantially diversify biological cell states and influence cellular
function. The functional impact of splicing has to be estimated at protein level, typically by …

The potential for using shell proteins in gastropod systematics, assessed in patellogastropod limpets

DJ Colgan - Zoological Journal of the Linnean Society, 2022 - academic.oup.com
This investigation of the application of shell protein information to gastropod systematics
initially utilized available Lottia gigantea sequences and a transcriptome of Patelloida …