The last universal common ancestor between ancient Earth chemistry and the onset of genetics

MC Weiss, M Preiner, JC Xavier, V Zimorski… - PLoS …, 2018 - journals.plos.org
All known life forms trace back to a last universal common ancestor (LUCA) that witnessed
the onset of Darwinian evolution. One can ask questions about LUCA in various ways, the …

On the evolutionary history of the twenty encoded amino acids

A Kirschning - Chemistry–A European Journal, 2022 - Wiley Online Library
Abstract α‐Amino acids are essential molecular constituents of life, twenty of which are
privileged because they are encoded by the ribosomal machinery. The question remains …

Robust genetic codes enhance protein evolvability

H Rozhoňová, C Martí-Gómez, DM McCandlish… - PLoS …, 2024 - journals.plos.org
The standard genetic code defines the rules of translation for nearly every life form on Earth.
It also determines the amino acid changes accessible via single-nucleotide mutations, thus …

The alanine world model for the development of the amino acid repertoire in protein biosynthesis

V Kubyshkin, N Budisa - International journal of molecular sciences, 2019 - mdpi.com
A central question in the evolution of the modern translation machinery is the origin and
chemical ethology of the amino acids prescribed by the genetic code. The RNA World …

Incorporation of non-standard amino acids into proteins: challenges, recent achievements, and emerging applications

X Jin, OJ Park, SH Hong - Applied microbiology and biotechnology, 2019 - Springer
The natural genetic code only allows for 20 standard amino acids in protein translation, but
genetic code reprogramming enables the incorporation of non-standard amino acids …

Evaluation of existing guidelines for their adequacy for the microbial characterisation and environmental risk assessment of microorganisms obtained through …

EFSA Scientific Committee, S More, V Bampidis… - EFSA …, 2020 - Wiley Online Library
EFSA was asked by the European Commission to consider synthetic biology developments
for agri‐food use in the near future and to determine if the use of this technology is expected …

Xenobiology: A Journey towards parallel life forms

N Budisa, V Kubyshkin, M Schmidt - ChemBioChem, 2020 - Wiley Online Library
Xenobiology is the science of estranged life forms. More specifically, this is an emergent
technoscience that combines advances in genetic engineering with the design of biological …

Auxotrophy to Xeno-DNA: an exploration of combinatorial mechanisms for a high-fidelity biosafety system for synthetic biology applications

CM Whitford, S Dymek, D Kerkhoff, C März… - Journal of Biological …, 2018 - Springer
Background Biosafety is a key aspect in the international Genetically Engineered Machine
(iGEM) competition, which offers student teams an amazing opportunity to pursue their own …

[HTML][HTML] On universal coding events in protein biogenesis

V Kubyshkin, CG Acevedo-Rocha, N Budisa - Biosystems, 2018 - Elsevier
The complete ribosomal protein synthesis cycle and codon-amino acids associations are
universally preserved in all life taxa on Earth. This process is accompanied by a set of …

[HTML][HTML] Anticipating alien cells with alternative genetic codes: away from the alanine world!

V Kubyshkin, N Budisa - Current opinion in biotechnology, 2019 - Elsevier
Highlights•To change the genetic code, we need to understand how it was originally
set.•The amino acid repertoire of the genetic code consists mainly of derivatives of …