The atomic simulation environment—a Python library for working with atoms

AH Larsen, JJ Mortensen, J Blomqvist… - Journal of Physics …, 2017 - iopscience.iop.org
The atomic simulation environment (ASE) is a software package written in the Python
programming language with the aim of setting up, steering, and analyzing atomistic …

Machine learning a general-purpose interatomic potential for silicon

AP Bartók, J Kermode, N Bernstein, G Csányi - Physical Review X, 2018 - APS
The success of first-principles electronic-structure calculation for predictive modeling in
chemistry, solid-state physics, and materials science is constrained by the limitations on …

Optim: A mathematical optimization package for Julia

P Mogensen, A Riseth - Journal of Open Source Software, 2018 - ora.ox.ac.uk
Optim provides a range of optimization capabilities written in the Julia programming
language (Bezanson et al. 2017). Our aim is to enable researchers, users, and other Julia …

[HTML][HTML] The ONETEP linear-scaling density functional theory program

JCA Prentice, J Aarons, JC Womack… - The Journal of …, 2020 - pubs.aip.org
We present an overview of the onetep program for linear-scaling density functional theory
(DFT) calculations with large basis set (plane-wave) accuracy on parallel computers. The …

Assessment and optimization of the fast inertial relaxation engine (fire) for energy minimization in atomistic simulations and its implementation in lammps

J Guénolé, WG Nöhring, A Vaid, F Houllé, Z Xie… - Computational Materials …, 2020 - Elsevier
In atomistic simulations, pseudo-dynamical relaxation schemes often exhibit better
performance and accuracy in finding local minima than line-search-based descent …

Unraveling thermal transport correlated with atomistic structures in amorphous gallium oxide via machine learning combined with experiments

Y Liu, H Liang, L Yang, G Yang, H Yang… - Advanced …, 2023 - Wiley Online Library
Thermal transport properties of amorphous materials are crucial for their emerging
applications in energy and electronic devices. However, understanding and controlling …

De novo exploration and self-guided learning of potential-energy surfaces

N Bernstein, G Csányi, VL Deringer - npj Computational Materials, 2019 - nature.com
Interatomic potential models based on machine learning (ML) are rapidly developing as
tools for material simulations. However, because of their flexibility, they require large fitting …

[HTML][HTML] GPAW: An open Python package for electronic structure calculations

JJ Mortensen, AH Larsen, M Kuisma… - The Journal of …, 2024 - pubs.aip.org
We review the GPAW open-source Python package for electronic structure calculations.
GPAW is based on the projector-augmented wave method and can solve the self-consistent …

Large scale and linear scaling DFT with the CONQUEST code

A Nakata, JS Baker, SY Mujahed… - The Journal of …, 2020 - pubs.aip.org
We survey the underlying theory behind the large-scale and linear scaling density functional
theory code, conquest, which shows excellent parallel scaling and can be applied to …

Calculation of dislocation binding to helium-vacancy defects in tungsten using hybrid ab initio-machine learning methods

P Grigorev, AM Goryaeva, MC Marinica, JR Kermode… - Acta Materialia, 2023 - Elsevier
Calculations of dislocation-defect interactions are essential to model metallic strength, but
the required system sizes are at or beyond ab initio limits. Current estimates thus have …